MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-23-P3

Family name MIR-23 (all species)
Seed UCACAUU
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-23a-1
Paralogues Gmo-Mir-23-P1  Gmo-Mir-23-P2b  Gmo-Mir-23-P4a 
Orthologues Aca-Mir-23-P3  Ami-Mir-23-P3  Bta-Mir-23-P3  Cfa-Mir-23-P3  Cja-Mir-23-P3  Cmi-Mir-23-P3a  Cmi-Mir-23-P3b  Cpi-Mir-23-P3  Cpo-Mir-23-P3  Dno-Mir-23-P3  Dre-Mir-23-P3  Eca-Mir-23-P3  Ete-Mir-23-P3  Gja-Mir-23-P3  Hsa-Mir-23-P3  Laf-Mir-23-P3  Lch-Mir-23-P3  Mal-Mir-23-P3  Mdo-Mir-23-P3  Mml-Mir-23-P3  Mmr-Mir-23-P3  Mmu-Mir-23-P3  Mun-Mir-23-P3e  Mun-Mir-23-P3f  Neu-Mir-23-P3  Oan-Mir-23-P3  Ocu-Mir-23-P3  Pab-Mir-23-P3  Pbv-Mir-23-P3  Rno-Mir-23-P3  Sha-Mir-23-P3  Sto-Mir-23-P3  Tgu-Mir-23-P3  Tni-Mir-23-P3  Xla-Mir-23-P3c  Xla-Mir-23-P3d  Xtr-Mir-23-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 contig99852: 2401-2463 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUCCUGUGUGUUGUUACUGUUGGCCAGGGGGAUUCCCGGCAGAGUGAUUUUUGAGAAUAAGACACUGAAUCACAUUGCCAGGGAUUUCCAAUGGCUUGCAGGGAGAAGCUUCACCUGGAGA
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Structure
        10          20        30         40        50        60
AAAUCCUGUGUGUUGUUA--    U     GG    U    -|    A       UUGAGAA 
                    CUGU GGCCA  GGGA UCCC GGCAG GUGAUUU       U
                    GACG UCGGU  CCUU AGGG CCGUU CACUAAG       A
AGAGGUCCACUUCGAAGAGG    U     AA    U    A^    A       UCACAGA 
 120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Gi He In Li Sk Sp Wh
Star sequence

Gmo-Mir-23-P3_5p*
mirBase accessionNone
Sequence 
0- GGGAUUCCCGGCAGAGUGAUUU -22
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Mature sequence

Gmo-Mir-23-P3_3p
mirBase accessionMIMAT0044005
Sequence 
40- AUCACAUUGCCAGGGAUUUCCAA -63
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