Mir-23-P3

MirGeneDB ID

Oan-Mir-23-P3

Family name

MIR-23 (all species)

Seed

UCACAUU

Species

Platypus (Ornithorhynchus anatinus)

MiRBase ID

oan-mir-23a

Paralogues

Oan-Mir-23-P2

Orthologues

Aca-Mir-23-P3 Ami-Mir-23-P3 Bta-Mir-23-P3 Cfa-Mir-23-P3 Cja-Mir-23-P3 Cmi-Mir-23-P3a Cmi-Mir-23-P3b Cpi-Mir-23-P3 Cpo-Mir-23-P3 Dno-Mir-23-P3 Dre-Mir-23-P3 Eca-Mir-23-P3 Ete-Mir-23-P3 Gja-Mir-23-P3 Gmo-Mir-23-P3 Hsa-Mir-23-P3 Laf-Mir-23-P3 Lch-Mir-23-P3 Mal-Mir-23-P3 Mdo-Mir-23-P3 Mml-Mir-23-P3 Mmr-Mir-23-P3 Mmu-Mir-23-P3 Mun-Mir-23-P3e Mun-Mir-23-P3f Neu-Mir-23-P3 Ocu-Mir-23-P3 Pab-Mir-23-P3 Pbv-Mir-23-P3 Rno-Mir-23-P3 Sha-Mir-23-P3 Sto-Mir-23-P3 Tgu-Mir-23-P3 Tni-Mir-23-P3 Xla-Mir-23-P3c Xla-Mir-23-P3d Xtr-Mir-23-P3

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(mOrnAna1.p.v1_plustraces)

Oan-Mir-23-P1_KAAE-bpy46e04: 255-315 [-]

Precursor
(pre-Mir +30nt flank)

UCUACCCGAGCCCCUCUGCCGCCGGCGGCUGGGGUUCCUGGUGAUGCGAUUUUCUUGUGCUCGCCAAAAUCACAUUGCCAGGGAUUUCCAACUGGCGGCGUGCCCAGCUGGCAGGAGUGCC

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Structure

        10          20        30         40        50         
UCUACCCGAGCCCCUCU-  -     G   C   -|        UG   C     UCUUGU 
                  GC CGCCG CGG UGG GGUUCCUGG  AUG GAUUU      G
                  CG GCGGC GUC ACC UUAGGGACC  UAC CUAAA      C
CCGUGAGGACGGUCGACC  U     G   A   U^        GU   A     ACCGCU 
 .       110       100        90        80        70        60

Deep sequencing

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Comment

Not in assenbmly but in trace archives.

3' NTU

Motifs

UG at 5p(-14)

Tissue expression

Br	Ce	He	Ki	Te

Star sequence

Oan-Mir-23-P3_5p*

mirBase accession

MIMAT0007060

Sequence

0- GGGGUUCCUGGUGAUGCGAUUU -22

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Mature sequence

Oan-Mir-23-P3_3p

mirBase accession

MIMAT0007061

Sequence

38- AUCACAUUGCCAGGGAUUUCCAA -61

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