MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-23-P3

Family name MIR-23 (all species)
Seed UCACAUU
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-23a-2
Paralogues Dre-Mir-23-P1  Dre-Mir-23-P2a  Dre-Mir-23-P2b  Dre-Mir-23-P4a 
Orthologues Aca-Mir-23-P3  Ami-Mir-23-P3  Bta-Mir-23-P3  Cfa-Mir-23-P3  Cja-Mir-23-P3  Cmi-Mir-23-P3a  Cmi-Mir-23-P3b  Cpi-Mir-23-P3  Cpo-Mir-23-P3  Dno-Mir-23-P3  Eca-Mir-23-P3  Ete-Mir-23-P3  Gja-Mir-23-P3  Gmo-Mir-23-P3  Hsa-Mir-23-P3  Laf-Mir-23-P3  Lch-Mir-23-P3  Mal-Mir-23-P3  Mdo-Mir-23-P3  Mml-Mir-23-P3  Mmr-Mir-23-P3  Mmu-Mir-23-P3  Mun-Mir-23-P3e  Mun-Mir-23-P3f  Neu-Mir-23-P3  Oan-Mir-23-P3  Ocu-Mir-23-P3  Pab-Mir-23-P3  Pbv-Mir-23-P3  Rno-Mir-23-P3  Sha-Mir-23-P3  Sto-Mir-23-P3  Tgu-Mir-23-P3  Tni-Mir-23-P3  Xla-Mir-23-P3c  Xla-Mir-23-P3d  Xtr-Mir-23-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr3: 13406243-13406303 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-23-P3)		 Mir-23-P3 chr3: 13406243-13406303 [+] UCSC Ensembl
Mir-27-P3 chr3: 13406464-13406527 [+] UCSC Ensembl
Mir-24-P3 chr3: 13412992-13413050 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUCCAGACCCUCCUCUUCUGCCGGCCAGGGGAAUUCCUGGCAGAGUGAUUUUUAAACCUAAUGACUGAAUCACAUUGCCAGGGAUUUCCAAUGGCUCGUGUGACUCAGAGACACGCCAGA
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Structure
        10        20           30        40        50          
AAUCCAGACCCUCCUCUUCU  -  -    G-|              A       UUAAACC 
                    GC CG GCCA  GGGAAUUCCUGGCAG GUGAUUU       \
                    UG GC CGGU  CCUUUAGGGACCGUU CACUAAG       U
AGACCGCACAGAGACUCAG-  U  U    AA^              A       UCAGUAA 
 .       110        100        90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-23-P3_5p*
mirBase accessionMIMAT0031944
Sequence 
0- GGAAUUCCUGGCAGAGUGAUUU -22
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Mature sequence

Dre-Mir-23-P3_3p
mirBase accessionMIMAT0001790
Sequence 
39- AUCACAUUGCCAGGGAUUUCCA -61
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Proposed targets TargetScanFish: dre-miR-23a