MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-23-P3

Family name MIR-23 (all species)
Seed UCACAUU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-23-P1  Sto-Mir-23-P2  Sto-Mir-23-P4 
Orthologues Aca-Mir-23-P3  Ami-Mir-23-P3  Bta-Mir-23-P3  Cfa-Mir-23-P3  Cja-Mir-23-P3  Cmi-Mir-23-P3a  Cmi-Mir-23-P3b  Cpi-Mir-23-P3  Cpo-Mir-23-P3  Dno-Mir-23-P3  Dre-Mir-23-P3  Eca-Mir-23-P3  Ete-Mir-23-P3  Gja-Mir-23-P3  Gmo-Mir-23-P3  Hsa-Mir-23-P3  Laf-Mir-23-P3  Lch-Mir-23-P3  Mal-Mir-23-P3  Mdo-Mir-23-P3  Mml-Mir-23-P3  Mmr-Mir-23-P3  Mmu-Mir-23-P3  Mun-Mir-23-P3e  Mun-Mir-23-P3f  Neu-Mir-23-P3  Oan-Mir-23-P3  Ocu-Mir-23-P3  Pab-Mir-23-P3  Pbv-Mir-23-P3  Rno-Mir-23-P3  Sha-Mir-23-P3  Tgu-Mir-23-P3  Tni-Mir-23-P3  Xla-Mir-23-P3c  Xla-Mir-23-P3d  Xtr-Mir-23-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01001728.1: 158875-158934 [-]
Precursor
(pre-Mir +30nt flank)
ACUGCAAGAUAUUGCUUGCUGUGGCUGGCUGGGUUCCUGGCAGAGUGAUUUGAUUUAAUAAUGUAAAAUCACAUUGCCAGGGAUUACCAACCUGUCACCAGCUUUUACCAACCACUCCUA
Get precursor sequence
Structure
        10         20         30          40        50        
ACUGCAAGAUAUUGCUU-   -     U  C   --|          A       GAUUUA 
                  GCU GUGGC GG UGG  GUUCCUGGCAG GUGAUUU      A
                  CGA CACUG CC ACC  UAGGGACCGUU CACUAAA      U
AUCCUCACCAACCAUUUU   C     U  A   AU^          A       AUGUAA 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Star sequence

Sto-Mir-23-P3_5p*
mirBase accessionNone
Sequence 
0- GGGUUCCUGGCAGAGUGAUUU -21
Get sequence
Mature sequence

Sto-Mir-23-P3_3p
mirBase accessionNone
Sequence 
37- AUCACAUUGCCAGGGAUUACCAA -60
Get sequence