MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-27-P3

Family name MIR-27 (all species)
Seed UCACAGU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-27-P2 
Orthologues Aca-Mir-27-P3  Ami-Mir-27-P3  Bta-Mir-27-P3  Cfa-Mir-27-P3  Cja-Mir-27-P3  Cmi-Mir-27-P3  Cpi-Mir-27-P3  Cpo-Mir-27-P3  Dno-Mir-27-P3  Dre-Mir-27-P3  Eca-Mir-27-P3  Gga-Mir-27-P3  Gja-Mir-27-P3  Gmo-Mir-27-P3  Hsa-Mir-27-P3  Laf-Mir-27-P3  Lch-Mir-27-P3  Loc-Mir-27-P3  Mal-Mir-27-P3  Mdo-Mir-27-P3  Mml-Mir-27-P3  Mmr-Mir-27-P3  Mmu-Mir-27-P3  Neu-Mir-27-P3  Oan-Mir-27-P3  Ocu-Mir-27-P3  Pab-Mir-27-P3  Pbv-Mir-27-P3  Rno-Mir-27-P3  Sha-Mir-27-P3  Sto-Mir-27-P3a  Sto-Mir-27-P3b  Tgu-Mir-27-P3  Tni-Mir-27-P3  Xla-Mir-27-P3c  Xla-Mir-27-P3d  Xtr-Mir-27-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(echTel2)		 JH980397: 3706321-3706382 [+] UCSC
Precursor
(pre-Mir +30nt flank)
GAGGCUCCGCCGGUGCCUGGCCUGAGGAGCAGGGCUUAGCUGCUUGUGAGCAGGUUCCACACCAAAUCGUGUUCACAGUGGCUAAGUUCCGCCCCCGGGGCCCCCGCCUCGCCCUGGCCCUG
Get precursor sequence
Structure
        10          20        30        40        50        60 
GAGGCUCCGCCGGUGCCU--|    GA  A  A         UG  U       GGUUCCAC 
                    GGCCU  GG GC GGGCUUAGC  CU GUGAGCA        \
                    CCGGG  CC CG CUUGAAUCG  GA CACUUGU        A
GUCCCGGUCCCGCUCCGCCC^    GC  C  C         GU  -       GCUAAACC 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ete-Mir-27-P3_5p*
mirBase accessionNone
Sequence 
0- AGGGCUUAGCUGCUUGUGAGCA -22
Get sequence
Mature sequence

Ete-Mir-27-P3_3p
mirBase accessionNone
Sequence 
41- UUCACAGUGGCUAAGUUCCGC -62
Get sequence