MirGeneDB ID | Mmr-Mir-27-P3 |
Family name |
MIR-27 (all species) |
Seed |
UCACAGU |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
|
Paralogues |
Mmr-Mir-27-P2
|
Orthologues |
Aca-Mir-27-P3
Ami-Mir-27-P3
Bta-Mir-27-P3
Cfa-Mir-27-P3
Cja-Mir-27-P3
Cmi-Mir-27-P3
Cpi-Mir-27-P3
Cpo-Mir-27-P3
Dno-Mir-27-P3
Dre-Mir-27-P3
Eca-Mir-27-P3
Ete-Mir-27-P3
Gga-Mir-27-P3
Gja-Mir-27-P3
Gmo-Mir-27-P3
Hsa-Mir-27-P3
Laf-Mir-27-P3
Lch-Mir-27-P3
Loc-Mir-27-P3
Mal-Mir-27-P3
Mdo-Mir-27-P3
Mml-Mir-27-P3
Mmu-Mir-27-P3
Neu-Mir-27-P3
Oan-Mir-27-P3
Ocu-Mir-27-P3
Pab-Mir-27-P3
Pbv-Mir-27-P3
Rno-Mir-27-P3
Sha-Mir-27-P3
Sto-Mir-27-P3a
Sto-Mir-27-P3b
Tgu-Mir-27-P3
Tni-Mir-27-P3
Xla-Mir-27-P3c
Xla-Mir-27-P3d
Xtr-Mir-27-P3
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Vertebrata
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007684.1: 1345853-1345914 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CCCCAAGCCCGUGUGCCUGGCCUGAGGAGCAGGGCUUAGCUGCUUGUGAGCAGGGUCCACGCCAAAUCAUGUUCACAGUGGCUAAGUUCCGCCCCCCGGGCCCCCACCUCCUCGGGCCGUGC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CCCCAAGCCCGUGUGCCU--| A A A UG U GGGUCCAC
GGCCUG GG GC GGGCUUAGC CU GUGAGCA \
CCGGGC CC CG CUUGAAUCG GA CACUUGU G
CGUGCCGGGCUCCUCCACCC^ C C C GU - ACUAAACC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Mmr-Mir-27-P3_5p* |
mirBase accession | None |
Sequence |
0- AGGGCUUAGCUGCUUGUGAGCA -22
Get sequence
|
Mature sequence |
Mmr-Mir-27-P3_3p |
mirBase accession | None |
Sequence |
41- UUCACAGUGGCUAAGUUCCGC -62
Get sequence
|