MirGeneDB 3.0
39 microRNA genes with seed CUACAGU
Sort by genome coordinates Motifs
MirGeneDB ID ▼ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Xtr-Mir-139 xtr-mir-139 MIR-139 CUACAGU MIMAT0003600 None chr2 170077882 170077940 - Gnathostomata Gnathostomata No
Tni-Mir-139 None MIR-139 CUACAGU None None Un_random 82311596 82311657 - Gnathostomata Gnathostomata No
Tgu-Mir-139 tgu-mir-139 MIR-139 CUACAGU MIMAT0014500 MIMAT0014626 1 4315039 4315097 + Gnathostomata Gnathostomata No 1
Sto-Mir-139 None MIR-139 CUACAGU None None BFAA01014933.1 12442 12501 + Gnathostomata Gnathostomata Unknown 1
Spt-Mir-139 None MIR-139 CUACAGU None None QEPC01001076.1 1155763 1155821 - Gnathostomata Gnathostomata Unknown
Sha-Mir-139 sha-mir-139 MIR-139 CUACAGU MIMAT0022803 None GL849732.1 511096 511154 + Gnathostomata Gnathostomata Yes 1 1
Rno-Mir-139 rno-mir-139 MIR-139 CUACAGU MIMAT0000845 MIMAT0004735 chr1 166589551 166589609 + Gnathostomata Gnathostomata Yes 1
Pbv-Mir-139 pbv-mir-139 MIR-139 CUACAGU MIMAT0038951 MIMAT0038952 KE954243.1 261592 261650 - Gnathostomata Gnathostomata No 1 1
Pab-Mir-139 None MIR-139 CUACAGU None None CM054688.2 74654314 74654372 - Gnathostomata Gnathostomata No 1 1
Ocu-Mir-139 ocu-mir-139 MIR-139 CUACAGU MIMAT0048239 MIMAT0048240 chr1 143799359 143799417 + Gnathostomata Gnathostomata No 1
Oan-Mir-139 oan-mir-139 MIR-139 CUACAGU MIMAT0006904 MIMAT0006905 NC_041729.1 140872749 140872807 - Gnathostomata Gnathostomata No 1
Neu-Mir-139 None MIR-139 CUACAGU None None CM051817.1 133263870 133263928 + Gnathostomata Gnathostomata No 1 1
Mun-Mir-139 None MIR-139 CUACAGU None None 139_LR594635.1:16720146-16720405 101 160 + Gnathostomata Gnathostomata Unknown
Mmu-Mir-139 mmu-mir-139 MIR-139 CUACAGU MIMAT0000656 MIMAT0004662 chr7 101475382 101475440 + Gnathostomata Gnathostomata No 1
Mmr-Mir-139 None MIR-139 CUACAGU None None CM007665.1 57556817 57556875 - Gnathostomata Gnathostomata No 1
Mml-Mir-139 mml-mir-139 MIR-139 CUACAGU MIMAT0006195 MIMAT0006196 CM014349.1 65608842 65608900 - Gnathostomata Gnathostomata No 1 1
Mdo-Mir-139 mdo-mir-139 MIR-139 CUACAGU MIMAT0012744 MIMAT0026936 4 347282331 347282389 + Gnathostomata Gnathostomata No 1 1
Mal-Mir-139 None MIR-139 CUACAGU None None KV884890.1 279639 279700 + Gnathostomata Gnathostomata No 1 1
Loc-Mir-139 None MIR-139 CUACAGU None None LG3 12274670 12274728 - Gnathostomata Gnathostomata No 1
Lch-Mir-139 None MIR-139 CUACAGU None None JH127329.1 94314 94372 - Gnathostomata Gnathostomata Unknown
Laf-Mir-139 None MIR-139 CUACAGU None None GL010106.1 7156385 7156443 + Gnathostomata Gnathostomata No 1
Hsa-Mir-139 hsa-mir-139 MIR-139 CUACAGU MIMAT0000250 MIMAT0004552 chr11 72615066 72615124 - Gnathostomata Gnathostomata No 1 1
Gmo-Mir-139 None MIR-139 CUACAGU None None contig476824 43 104 - Gnathostomata Gnathostomata No 1
Gja-Mir-139 None MIR-139 CUACAGU None None NW_015176525.1 108396 108454 - Gnathostomata Gnathostomata Unknown
Ete-Mir-139 None MIR-139 CUACAGU None None JH980327 1412159 1412217 - Gnathostomata Gnathostomata No 1
Eca-Mir-139 eca-mir-139 MIR-139 CUACAGU MIMAT0012983 MIMAT0012984 CM009154.1 73259104 73259162 + Gnathostomata Gnathostomata No 1
Dre-Mir-139 dre-mir-139 MIR-139 CUACAGU MIMAT0003349 MIMAT0032008 LKPD01049450.1 531 590 - Gnathostomata Gnathostomata No 1
Dno-Mir-139 dno-mir-139 MIR-139 CUACAGU MIMAT0047651 MIMAT0047652 JH579338 404462 404520 - Gnathostomata Gnathostomata No 1
Cpo-Mir-139 cpo-mir-139 MIR-139 CUACAGU MIMAT0047002 MIMAT0047003 scaffold_103 2790723 2790781 + Gnathostomata Gnathostomata No 1
Cpi-Mir-139 cpi-mir-139 MIR-139 CUACAGU MIMAT0037762 MIMAT0037763 JH584598 2587189 2587247 + Gnathostomata Gnathostomata No
Cmi-Mir-139 None MIR-139 CUACAGU None None KI637794.1 117 174 - Gnathostomata Gnathostomata No 1
Cli-Mir-139 cli-mir-139 MIR-139 CUACAGU MIMAT0038525 MIMAT0038526 scaffold1323 18345 18403 + Gnathostomata Gnathostomata No 1 1
Cja-Mir-139 None MIR-139 CUACAGU None None CM021925.1 65053661 65053719 + Gnathostomata Gnathostomata Unknown 1 1
Cfa-Mir-139 cfa-mir-139 MIR-139 CUACAGU None MIMAT0006645 chr21 25597024 25597082 + Gnathostomata Gnathostomata No 1
Bta-Mir-139 bta-mir-139 MIR-139 CUACAGU MIMAT0003788 None NC_037342.1 52174696 52174754 - Gnathostomata Gnathostomata No 1
Ami-Mir-139 ami-mir-139 MIR-139 CUACAGU MIMAT0038158 MIMAT0038159 NW_017713116.1 33815 33873 + Gnathostomata Gnathostomata No
Aca-Mir-139 aca-mir-139 MIR-139 CUACAGU MIMAT0021762 MIMAT0021763 GL343695.1 186505 186563 - Gnathostomata Gnathostomata No
Xla-Mir-139-P1 None MIR-139 CUACAGU None None NW_016786261.1 15 75 + X. laevis Gnathostomata No
Xla-Mir-139-P2 None MIR-139 CUACAGU None None NC_030727.1 157598776 157598836 - X. laevis Gnathostomata No

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