MirGeneDB 3.0
MirGeneDB ID

Oan-Mir-139

Family name MIR-139 (all species)
Seed CUACAGU
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-139
Paralogues
Orthologues Aca-Mir-139  Ami-Mir-139  Bta-Mir-139  Cfa-Mir-139  Cja-Mir-139  Cli-Mir-139  Cmi-Mir-139  Cpi-Mir-139  Cpo-Mir-139  Dno-Mir-139  Dre-Mir-139  Eca-Mir-139  Ete-Mir-139  Gja-Mir-139  Gmo-Mir-139  Hsa-Mir-139  Laf-Mir-139  Lch-Mir-139  Loc-Mir-139  Mal-Mir-139  Mdo-Mir-139  Mml-Mir-139  Mmr-Mir-139  Mmu-Mir-139  Mun-Mir-139  Neu-Mir-139  Ocu-Mir-139  Pab-Mir-139  Pbv-Mir-139  Rno-Mir-139  Sha-Mir-139  Spt-Mir-139  Sto-Mir-139  Tgu-Mir-139  Tni-Mir-139  Xla-Mir-139-P1  Xla-Mir-139-P2  Xtr-Mir-139 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041729.1: 140872749-140872807 [-]
Precursor
(pre-Mir +30nt flank)
GGAUCAGGCUGUCGGGGGGCCCGGGUGUAGUCUACAGUGCAUGUGUCUCCAGGGACACUAGACAGCUGGAGACACAGCUCUGUUGGAUACAACCGAAGCCACUGGCUUCAGGAGAAGGG
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Structure
        10          20         30         40        50         
GGAUCAGGCUGUCGGGG--   C-|  G    G    -   U  A           GGACAC 
                   GGC  CGG UGUA UCUA CAG GC UGUGUCUCCAG      \
                   CCG  GCC ACAU AGGU GUC CG ACACAGAGGUC      U
GGGAAGAGGACUUCGGUCA   AA^  A    -    U   U  -           GACAGA 
       110       100        90         80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Oan-Mir-139_5p
mirBase accessionMIMAT0006904
Sequence 
0- UCUACAGUGCAUGUGUCUCCAGG -23
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Star sequence

Oan-Mir-139_3p*
mirBase accessionMIMAT0006905
Sequence 
36- UGGAGACACAGCUCUGUUGGAUA -59
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