MirGeneDB 2.1
MirGeneDB ID

Aca-Mir-190-P3

Family name MIR-190 (all species)
Seed GAUAUGU
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-190b
Paralogues Aca-Mir-190-P1 
Orthologues Aae-Mir-190  Ami-Mir-190-P3  Asu-Mir-190  Bfl-Mir-190  Bge-Mir-190  Bla-Mir-190  Bpl-Mir-190  Bta-Mir-190-P3  Cbr-Mir-190  Cel-Mir-190  Cfa-Mir-190-P3  Cgi-Mir-190  Cmi-Mir-190-P3  Cpi-Mir-190-P3  Cpo-Mir-190-P3  Cte-Mir-190  Dan-Mir-190  Dma-Mir-190  Dme-Mir-190  Dmo-Mir-190  Dno-Mir-190-P3  Dpu-Mir-190  Dre-Mir-190-P3  Dsi-Mir-190  Dya-Mir-190  Esc-Mir-190  Ete-Mir-190-P3  Gga-Mir-190-P3  Gja-Mir-190-P3  Gmo-Mir-190-P3  Hme-Mir-190  Hsa-Mir-190-P3  Isc-Mir-190  Lch-Mir-190-P3  Mal-Mir-190-P3  Mdo-Mir-190-P3  Mml-Mir-190-P3  Mmu-Mir-190-P3  Npo-Mir-190  Oan-Mir-190-P3  Obi-Mir-190  Ocu-Mir-190-P3  Ovu-Mir-190  Pbv-Mir-190-P3  Pfl-Mir-190  Pma-Mir-190-o3  Pmi-Mir-190  Rno-Mir-190-P3  Sha-Mir-190-P3  Sko-Mir-190  Spt-Mir-190-P3  Sto-Mir-190-P3  Tca-Mir-190  Tgu-Mir-190-P3  Tni-Mir-190-P3  Xbo-Mir-190  Xla-Mir-190-P3a  Xla-Mir-190-P3b  Xtr-Mir-190-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(anoCar2)		 G889P63465RJ23: 337-397 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUGCAGCUGACCCUCCCCCUGCUUCUGUCUGAUAUGUUUGAUAUUAGGUUGUUCUACUGGGAAACCAACUAAAUAUCAAACAUAUUCUUACAGCGCCAGGGCCCUUCCCACGCACCCCGG
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Structure
        10          20        30         40        50         
CCUGCAGCUGACCCUCC--     CUU    CU -|             A     UUCUAC 
                   CCCUG   CUGU  G AUAUGUUUGAUAUU GGUUG      U
                   GGGAC   GACA  C UAUACAAACUAUAA UCAAC      G
GGCCCCACGCACCCUUCCC     CGC    UU U^             A     CAAAGG 
 .       110       100        90        80        70        60
Deep sequencing
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CommentNot in assembly but in trace archive.
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sk To Wh
Mature sequence

Aca-Mir-190-P3_5p
mirBase accessionMIMAT0021823
Sequence 
0- UGAUAUGUUUGAUAUUAGGUUG -22
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Star sequence

Aca-Mir-190-P3_3p* (predicted)
mirBase accessionNone
Sequence 
38- ACUAAAUAUCAAACAUAUUCUUA -61
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