MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-190-P3

Family name MIR-190 (all species)
Seed GAUAUGU
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-190-P1 
Orthologues Aae-Mir-190  Aca-Mir-190-P3  Aga-Mir-190  Agr-Mir-190  Ami-Mir-190-P3  Asu-Mir-190  Bfl-Mir-190  Bge-Mir-190  Bko-Mir-190  Bla-Mir-190  Bpl-Mir-190  Bta-Mir-190-P3  Cbr-Mir-190  Cel-Mir-190  Cfa-Mir-190-P3  Cja-Mir-190-P3  Cmi-Mir-190-P3  Cpi-Mir-190-P3  Cpo-Mir-190-P3  Cte-Mir-190  Dan-Mir-190  Dlo-Mir-190  Dma-Mir-190  Dme-Mir-190  Dmo-Mir-190  Dno-Mir-190-P3  Dpu-Mir-190  Dre-Mir-190-P3  Dsi-Mir-190  Dya-Mir-190  Eba-Mir-190  Eca-Mir-190-P3  Egr-Mir-190  Esc-Mir-190  Ete-Mir-190-P3  Gga-Mir-190-P3  Gmo-Mir-190-P3  Gpa-Mir-190  Gsa-Mir-190  Hme-Mir-190  Hmi-Mir-190  Hru-Mir-190  Hsa-Mir-190-P3  Isc-Mir-190  Laf-Mir-190-P3  Lch-Mir-190-P3  Mal-Mir-190-P3  Mdo-Mir-190-P3  Mgi-Mir-190  Mml-Mir-190-P3  Mmr-Mir-190-P3  Mmu-Mir-190-P3  Mom-Mir-190  Neu-Mir-190-P3  Npo-Mir-190  Oan-Mir-190-P3  Obi-Mir-190  Ocu-Mir-190-P3  Ofu-Mir-190  Ovu-Mir-190  Pab-Mir-190-P3  Pau-Mir-190  Pbv-Mir-190-P3  Pca-Mir-190  Pdu-Mir-190  Pfl-Mir-190  Pma-Mir-190-o3  Pmi-Mir-190  Pve-Mir-190  Rno-Mir-190-P3  Rph-Mir-190  Sha-Mir-190-P3  Sko-Mir-190  Sma-Mir-190  Snu-Mir-190  Spt-Mir-190-P3  Sto-Mir-190-P3  Tca-Mir-190  Tgu-Mir-190-P3  Tni-Mir-190-P3  Tur-Mir-190  War-Mir-190  Xbo-Mir-190  Xla-Mir-190-P3a  Xla-Mir-190-P3b  Xtr-Mir-190-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015171502.1: 162103-162162 [-]
Precursor
(pre-Mir +30nt flank)
CGGGUAGCCUCCGCUUCCCCUGCUUCUGUCUGAUAUGUUUGAUAUUAGGUUGUUCUAUUGGGUAUCCAACUAAAUAUCAAACAUAUUCUGACAGCGCCAGGUUUGUUUCAACGGCCACCU
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Structure
        10         20        30         40        50         
CGGGUAGCCUCCGCUUCC-    CUU     U-|              A     UUCUAU 
                   CCUG   CUGUC  GAUAUGUUUGAUAUU GGUUG      U
                   GGAC   GACAG  UUAUACAAACUAUAA UCAAC      G
UCCACCGGCAACUUUGUUU    CGC     UC^              A     CUAUGG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Gja-Mir-190-P3_5p
mirBase accessionNone
Sequence 
0- UGAUAUGUUUGAUAUUAGGUUG -22
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Star sequence

Gja-Mir-190-P3_3p*
mirBase accessionNone
Sequence 
38- ACUAAAUAUCAAACAUAUUCUG -60
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