Mir-190-P3

MirGeneDB ID

Mmu-Mir-190-P3

Family name

MIR-190 (all species)

Seed

GAUAUGU

Species

House mouse (Mus musculus)

MiRBase ID

mmu-mir-190b

Paralogues

Mmu-Mir-190-P1

Orthologues

Aae-Mir-190 Aca-Mir-190-P3 Ami-Mir-190-P3 Asu-Mir-190 Bfl-Mir-190 Bge-Mir-190 Bla-Mir-190 Bpl-Mir-190 Bta-Mir-190-P3 Cbr-Mir-190 Cel-Mir-190 Cfa-Mir-190-P3 Cgi-Mir-190 Cmi-Mir-190-P3 Cpi-Mir-190-P3 Cpo-Mir-190-P3 Cte-Mir-190 Dan-Mir-190 Dma-Mir-190 Dme-Mir-190 Dmo-Mir-190 Dno-Mir-190-P3 Dpu-Mir-190 Dre-Mir-190-P3 Dsi-Mir-190 Dya-Mir-190 Esc-Mir-190 Ete-Mir-190-P3 Gga-Mir-190-P3 Gja-Mir-190-P3 Gmo-Mir-190-P3 Hme-Mir-190 Hsa-Mir-190-P3 Isc-Mir-190 Lch-Mir-190-P3 Mal-Mir-190-P3 Mdo-Mir-190-P3 Mml-Mir-190-P3 Npo-Mir-190 Oan-Mir-190-P3 Obi-Mir-190 Ocu-Mir-190-P3 Ovu-Mir-190 Pbv-Mir-190-P3 Pfl-Mir-190 Pma-Mir-190-o3 Pmi-Mir-190 Rno-Mir-190-P3 Sha-Mir-190-P3 Sko-Mir-190 Spt-Mir-190-P3 Sto-Mir-190-P3 Tca-Mir-190 Tgu-Mir-190-P3 Tni-Mir-190-P3 Xbo-Mir-190 Xla-Mir-190-P3a Xla-Mir-190-P3b Xtr-Mir-190-P3

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(mm10)

chr3: 90070030-90070089 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

ACGACCAGAGUUUGCCUGCCUGCUUCUGUGUGAUAUGUUUGAUAUUGGGUUGUUAAAUUAUGAACCAACUGAAUGUCAAGCAUACUCUCACAGCAGUAAGGAGACUUGGCACCACCUCCU

Get precursor sequence

Structure

        10         20         30         40        50         
ACGACCAGAGUUUGCCUG-  -    U     U  -|            G     UUAAAU 
                   CC UGCU CUGUG GA UAUGUUUGAUAUU GGUUG      \
                   GG AUGA GACAC CU AUACGAACUGUAA UCAAC      U
UCCUCCACCACGGUUCAGA  A    C     U  C^            G     CAAGUA 
.       110       100        90        80        70        60

Deep sequencing

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3' NTU

Motifs

UG at 5p(-14)

Tissue expression

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Mature sequence

Mmu-Mir-190-P3_5p

mirBase accession

MIMAT0004852

Sequence

0- UGAUAUGUUUGAUAUUGGGUUG -22

Get sequence

Proposed targets

microrna.org: MIMAT0004852
TargetScanVert: mmu-miR-190b-5p
miRDB: MIMAT0004852

Star sequence

Mmu-Mir-190-P3_3p*

mirBase accession

MIMAT0017267

Sequence

37- ACUGAAUGUCAAGCAUACUCUCA -60

Get sequence

Proposed targets

TargetScanVert: mmu-miR-190b-3p
miRDB: MIMAT0017267