Mir-190-P3

MirGeneDB ID

Hsa-Mir-190-P3

Family name

MIR-190 (all species)

Seed

GAUAUGU

Species

Human (Homo sapiens)

MiRBase ID

hsa-mir-190b

Paralogues

Hsa-Mir-190-P1

Orthologues

Aae-Mir-190 Aca-Mir-190-P3 Aga-Mir-190 Agr-Mir-190 Ami-Mir-190-P3 Asu-Mir-190 Bfl-Mir-190 Bge-Mir-190 Bko-Mir-190 Bla-Mir-190 Bpl-Mir-190 Bta-Mir-190-P3 Cbr-Mir-190 Cel-Mir-190 Cfa-Mir-190-P3 Cja-Mir-190-P3 Cmi-Mir-190-P3 Cpi-Mir-190-P3 Cpo-Mir-190-P3 Cte-Mir-190 Dan-Mir-190 Dlo-Mir-190 Dma-Mir-190 Dme-Mir-190 Dmo-Mir-190 Dno-Mir-190-P3 Dpu-Mir-190 Dre-Mir-190-P3 Dsi-Mir-190 Dya-Mir-190 Eba-Mir-190 Eca-Mir-190-P3 Egr-Mir-190 Esc-Mir-190 Ete-Mir-190-P3 Gga-Mir-190-P3 Gja-Mir-190-P3 Gmo-Mir-190-P3 Gpa-Mir-190 Gsa-Mir-190 Hme-Mir-190 Hmi-Mir-190 Hru-Mir-190 Isc-Mir-190 Laf-Mir-190-P3 Lch-Mir-190-P3 Mal-Mir-190-P3 Mdo-Mir-190-P3 Mgi-Mir-190 Mml-Mir-190-P3 Mmr-Mir-190-P3 Mmu-Mir-190-P3 Mom-Mir-190 Neu-Mir-190-P3 Npo-Mir-190 Oan-Mir-190-P3 Obi-Mir-190 Ocu-Mir-190-P3 Ofu-Mir-190 Ovu-Mir-190 Pab-Mir-190-P3 Pau-Mir-190 Pbv-Mir-190-P3 Pca-Mir-190 Pdu-Mir-190 Pfl-Mir-190 Pma-Mir-190-o3 Pmi-Mir-190 Pve-Mir-190 Rno-Mir-190-P3 Rph-Mir-190 Sha-Mir-190-P3 Sko-Mir-190 Sma-Mir-190 Snu-Mir-190 Spt-Mir-190-P3 Sto-Mir-190-P3 Tca-Mir-190 Tgu-Mir-190-P3 Tni-Mir-190-P3 Tur-Mir-190 War-Mir-190 Xbo-Mir-190 Xla-Mir-190-P3a Xla-Mir-190-P3b Xtr-Mir-190-P3

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(hg38)

chr1: 154193674-154193733 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

ACCCCCAAAGCUCUCCUGCCUGCUUCUGUGUGAUAUGUUUGAUAUUGGGUUGUUUAAUUAGGAACCAACUAAAUGUCAAACAUAUUCUUACAGCAGCAGGUGAUUCAGCACCACCCUCUU

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Structure

        10          20        30         40        50         
ACCCCCAAAGCUCUCCU--       U     U-|              G     UUUAAU 
                   GCCUGCU CUGUG  GAUAUGUUUGAUAUU GGUUG      \
                   UGGACGA GACAU  UUAUACAAACUGUAA UCAAC      U
UUCUCCCACCACGACUUAG       C     UC^              A     CAAGGA 
.       110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

Dc	Dc	Dr	Dr	Xp	Xp	Bl	Br	Br	Ce	Ce	Co	Fo	He	Ki	Le	Li	Li	Lu	Pa	Pl	Pl	Sk	Sk	Sk	Sm	Sp	Sp	St	Te	Th	Ut

Mature sequence

Hsa-Mir-190-P3_5p

mirBase accession

MIMAT0004929

Sequence

0- UGAUAUGUUUGAUAUUGGGUUG -22

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Proposed targets

microrna.org: MIMAT0004929
TargetScanVert: hsa-miR-190b
miRDB: MIMAT0004929

Star sequence

Hsa-Mir-190-P3_3p*

mirBase accession

MIMAT0037332

Sequence

37- ACUAAAUGUCAAACAUAUUCUUA -60

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