MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-551-P1

Family name MIR-551 (all species)
Seed CGACCCA
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-551a
Paralogues Cfa-Mir-551-P2 
Orthologues Ami-Mir-551-P1  Cja-Mir-551-P1  Cli-Mir-551-P1  Cmi-Mir-551-P1  Cpi-Mir-551-P1  Eca-Mir-551-P1  Gja-Mir-551-P1  Hsa-Mir-551-P1  Laf-Mir-551-P1  Lch-Mir-551-P1  Loc-Mir-551-P1  Mdo-Mir-551-P1  Mml-Mir-551-P1  Mmr-Mir-551-P1  Neu-Mir-551-P1  Pab-Mir-551-P1  Pbv-Mir-551-P1  Pma-Mir-551-o1  Sha-Mir-551-P1  Spt-Mir-551-P1  Xla-Mir-551-P1a  Xla-Mir-551-P1b  Xtr-Mir-551-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(canFam3_add)		 chr5: 58112721-58112780 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGGUCAGAGGGGACUGCCAGGUGACCCUGGAAAUCCAGAGUGGGUAAGGCCUGUCUGAUUGUGUCUAGGCGACCCACUCUUGGUUUCCAUGGUUGCCCUGGAGACCACAGAUGGGCAGG
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Structure
        10         20         30        40        50        60
CUGGUCAGAGGGGACUG-   -| UG   C        C         AAG    GUCUGA 
                  CCA GG  ACC UGGAAAUC AGAGUGGGU   GCCU      U
                  GGU CC  UGG ACCUUUGG UCUCACCCA   CGGA      U
GGACGGGUAGACACCAGA   C^ GU   U        U         G--    UCUGUG 
.       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Star sequence

Cfa-Mir-551-P1_5p*
mirBase accessionNone
Sequence 
0- GAAAUCCAGAGUGGGUAAGGCCU -23
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Mature sequence

Cfa-Mir-551-P1_3p
mirBase accessionMIMAT0009912
Sequence 
39- GCGACCCACUCUUGGUUUCCA -60
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Proposed targets TargetScanVert: cfa-miR-551a
miRDB: MIMAT0009912