Mir-551-P1

MirGeneDB ID

Mml-Mir-551-P1

Family name

MIR-551 (all species)

Seed

CGACCCA

Species

Rhesus monkey (Macaca mulatta)

MiRBase ID

mml-mir-551a

Paralogues

Mml-Mir-551-P2

Orthologues

Ami-Mir-551-P1 Cfa-Mir-551-P1 Cja-Mir-551-P1 Cli-Mir-551-P1 Cmi-Mir-551-P1 Cpi-Mir-551-P1 Eca-Mir-551-P1 Gja-Mir-551-P1 Hsa-Mir-551-P1 Laf-Mir-551-P1 Lch-Mir-551-P1 Loc-Mir-551-P1 Mdo-Mir-551-P1 Mmr-Mir-551-P1 Neu-Mir-551-P1 Pab-Mir-551-P1 Pbv-Mir-551-P1 Pma-Mir-551-o1 Sha-Mir-551-P1 Spt-Mir-551-P1 Xla-Mir-551-P1a Xla-Mir-551-P1b Xtr-Mir-551-P1

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(GCA_003339765.3_Mmul_10_traces)

CM014336.1: 220956911-220956970 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

GCUGCCAGAGGGGACUGCCGGGUGACCCUGGAAAUCCAGAGUGGGUGGGGCCUGUCUGACCAUUUCUAGGCGACCCACUCUUGGUUUCCAGGGUUGCCCUGGAAACCACAGAUGGGGAGG

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Structure

        10          20        30        40        50        60
GCUGCCAGAGGGGACUG-  -|  UG            C         GGG    GUCUGA 
                  CC GGG  ACCCUGGAAAUC AGAGUGGGU   GCCU      C
                  GG CCC  UGGGACCUUUGG UCUCACCCA   CGGA      C
GGAGGGGUAGACACCAAA  U^  GU            U         G--    UCUUUA 
.       110       100        90        80          70

Deep sequencing

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3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Bo	Br	Br	Br	He	Ki	Li	Lu	Ly	Sk	Sp	Te	Th

Star sequence

Mml-Mir-551-P1_5p*

mirBase accession

None

Sequence

0- GAAAUCCAGAGUGGGUGGGGCCU -23

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Mature sequence

Mml-Mir-551-P1_3p

mirBase accession

MIMAT0006419

Sequence

39- GCGACCCACUCUUGGUUUCCA -60

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Proposed targets

TargetScanVert: mml-miR-551a