MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-551-P1

Family name MIR-551 (all species)
Seed CGACCCA
Species Horse (Equus caballus)
MiRBase ID eca-mir-551a
Paralogues Eca-Mir-551-P2 
Orthologues Ami-Mir-551-P1  Cfa-Mir-551-P1  Cja-Mir-551-P1  Cli-Mir-551-P1  Cmi-Mir-551-P1  Cpi-Mir-551-P1  Gja-Mir-551-P1  Hsa-Mir-551-P1  Laf-Mir-551-P1  Lch-Mir-551-P1  Loc-Mir-551-P1  Mdo-Mir-551-P1  Mml-Mir-551-P1  Mmr-Mir-551-P1  Neu-Mir-551-P1  Pab-Mir-551-P1  Pbv-Mir-551-P1  Pma-Mir-551-o1  Sha-Mir-551-P1  Spt-Mir-551-P1  Xla-Mir-551-P1a  Xla-Mir-551-P1b  Xtr-Mir-551-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009149.1: 46757812-46757871 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUCUCCUGGGAGACUGCCGGGUGACUCUGGAAAUCCAGAGUGGGUGAGGCCUGUCUGACCAUUUCUAGGCGACCCACUCUUGGUUUCCAUGGUUGCCCUGGAAACCACAAACGCUGGGG
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Structure
        10          20        30        40        50        60
CUUCUCCUGGGAGACUG-  -|  UG   C        C         GAG    GUCUGA 
                  CC GGG  ACU UGGAAAUC AGAGUGGGU   GCCU      C
                  GG CCC  UGG ACCUUUGG UCUCACCCA   CGGA      C
GGGGUCGCAAACACCAAA  U^  GU   U        U         G--    UCUUUA 
.       110       100        90        80          70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Star sequence

Eca-Mir-551-P1_5p*
mirBase accessionNone
Sequence 
0- GAAAUCCAGAGUGGGUGAGGCCU -23
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Mature sequence

Eca-Mir-551-P1_3p
mirBase accessionMIMAT0012921
Sequence 
39- GCGACCCACUCUUGGUUUCCA -60
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