MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-551-P1

Family name MIR-551 (all species)
Seed CGACCCA
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-551-P2 
Orthologues Ami-Mir-551-P1  Cfa-Mir-551-P1  Cja-Mir-551-P1  Cli-Mir-551-P1  Cmi-Mir-551-P1  Cpi-Mir-551-P1  Eca-Mir-551-P1  Gja-Mir-551-P1  Hsa-Mir-551-P1  Laf-Mir-551-P1  Lch-Mir-551-P1  Loc-Mir-551-P1  Mdo-Mir-551-P1  Mml-Mir-551-P1  Mmr-Mir-551-P1  Neu-Mir-551-P1  Pbv-Mir-551-P1  Pma-Mir-551-o1  Sha-Mir-551-P1  Spt-Mir-551-P1  Xla-Mir-551-P1a  Xla-Mir-551-P1b  Xtr-Mir-551-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054679.2: 230682469-230682528 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGCCAGAGGGGACUGCCGGGUGACCCUGGAAAUCCAGAGUGGGUGGGGCCUGUCUGACUGUUUCUAGGCGACCCACUCUUGGUUUCCAGGGUUGCCCUGGAAACCACAGAUGGGGAGG
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Structure
        10          20        30        40        50        60
GCUGCCAGAGGGGACUG-  -|  UG            C         GGG    GUCUGA 
                  CC GGG  ACCCUGGAAAUC AGAGUGGGU   GCCU      C
                  GG CCC  UGGGACCUUUGG UCUCACCCA   CGGA      U
GGAGGGGUAGACACCAAA  U^  GU            U         G--    UCUUUG 
.       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Li Li
Star sequence

Pab-Mir-551-P1_5p*
mirBase accessionNone
Sequence 
0- GAAAUCCAGAGUGGGUGGGGCCU -23
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Mature sequence

Pab-Mir-551-P1_3p
mirBase accessionNone
Sequence 
39- GCGACCCACUCUUGGUUUCCA -60
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