MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-551-P1

Family name MIR-551 (all species)
Seed CGACCCA
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-551a
Paralogues Pbv-Mir-551-P2 
Orthologues Ami-Mir-551-P1  Cfa-Mir-551-P1  Cja-Mir-551-P1  Cli-Mir-551-P1  Cmi-Mir-551-P1  Cpi-Mir-551-P1  Eca-Mir-551-P1  Gja-Mir-551-P1  Hsa-Mir-551-P1  Laf-Mir-551-P1  Lch-Mir-551-P1  Loc-Mir-551-P1  Mdo-Mir-551-P1  Mml-Mir-551-P1  Mmr-Mir-551-P1  Neu-Mir-551-P1  Pab-Mir-551-P1  Pma-Mir-551-o1  Sha-Mir-551-P1  Spt-Mir-551-P1  Xla-Mir-551-P1a  Xla-Mir-551-P1b  Xtr-Mir-551-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE954346.1: 172839-172898 [-]
Precursor
(pre-Mir +30nt flank)
UCUCCAAAGCUUUGCCUGUUGUUCACCUGGGAAAUCAAGAAUGGGUGGGGCCUGUGAAUAUGAGAGGAGGCGACCCACUCUUGGUUUCCAAGGUCAGCAGGGACCCUGUUCUUGUGCCCU
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Structure
        10          20        30        40        50        60
UCUCCAAAGCUUUGCCUG--|    C    G           A     GGG    GUGAAU 
                    UUGUU ACCU GGAAAUCAAGA UGGGU   GCCU      A
                    GACGA UGGA CCUUUGGUUCU ACCCA   CGGA      U
UCCCGUGUUCUUGUCCCAGG^    C    A           C     G--    GGAGAG 
.       110       100        90        80          70
Deep sequencing
3' NTU Yes
MotifsUG at 5p(-14), UGUG in loop
Tissue expression
-   +
To
Star sequence

Pbv-Mir-551-P1_5p*
mirBase accessionNone
Sequence 
0- GAAAUCAAGAAUGGGUGGGGCCU -23
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Mature sequence

Pbv-Mir-551-P1_3p
mirBase accessionMIMAT0039067
Sequence 
39- GCGACCCACUCUUGGUUUCCA -60
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