MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-551-P1

Family name MIR-551 (all species)
Seed CGACCCA
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-551a
Paralogues Mdo-Mir-551-P2 
Orthologues Ami-Mir-551-P1  Cfa-Mir-551-P1  Cja-Mir-551-P1  Cli-Mir-551-P1  Cmi-Mir-551-P1  Cpi-Mir-551-P1  Eca-Mir-551-P1  Gja-Mir-551-P1  Hsa-Mir-551-P1  Laf-Mir-551-P1  Lch-Mir-551-P1  Loc-Mir-551-P1  Mml-Mir-551-P1  Mmr-Mir-551-P1  Neu-Mir-551-P1  Pab-Mir-551-P1  Pbv-Mir-551-P1  Pma-Mir-551-o1  Sha-Mir-551-P1  Spt-Mir-551-P1  Xla-Mir-551-P1a  Xla-Mir-551-P1b  Xtr-Mir-551-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)		 Un: 26014242-26014301 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUCUUCAGAGACUUCCCACUGUUGACCCUGGAAAUCCAGAAGGGGUGGAGCCUGUUGGACAGUUUCUAGGCGACCCAUUCUUGGUUUCAAGGGUUGCCAUGGAAACCACCAAGAAGCAUG
Get precursor sequence
Structure
        10          20        30        40        50        60
UUCUUCAGAGACUUCCCAC--| UU      G      C    G    GGA    GUUGGA 
                     UG  GACCCU GAAAUC AGAA GGGU   GCCU      C
                     AC  UUGGGA CUUUGG UCUU CCCA   CGGA      A
GUACGAAGAACCACCAAAGGU^ CG      A      U    A    G--    UCUUUG 
.       110       100        90        80          70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Star sequence

Mdo-Mir-551-P1_5p*
mirBase accessionNone
Sequence 
0- GAAAUCCAGAAGGGGUGGAGCCU -23
Get sequence
Mature sequence

Mdo-Mir-551-P1_3p
mirBase accessionMIMAT0012763
Sequence 
39- GCGACCCAUUCUUGGUUUCAA -60
Get sequence
Proposed targets TargetScanVert: mdo-miR-551a