MirGeneDB 3.0
MirGeneDB ID

Gga-Mir-202

Family name MIR-202 (all species)
Seed UCCUAUG
Species Chicken (Gallus gallus)
MiRBase ID gga-mir-202
Paralogues
Orthologues Aca-Mir-202  Ami-Mir-202  Bta-Mir-202  Cfa-Mir-202  Cja-Mir-202  Cli-Mir-202  Cmi-Mir-202  Cpi-Mir-202  Cpo-Mir-202  Dno-Mir-202  Dre-Mir-202  Ebu-Mir-202  Eca-Mir-202  Ete-Mir-202  Gja-Mir-202  Gmo-Mir-202  Hsa-Mir-202  Laf-Mir-202  Lch-Mir-202  Loc-Mir-202  Mal-Mir-202  Mml-Mir-202  Mmr-Mir-202  Mmu-Mir-202  Mun-Mir-202  Neu-Mir-202  Oan-Mir-202  Ocu-Mir-202  Pab-Mir-202  Pbv-Mir-202  Pma-Mir-202-P5  Pma-Mir-202-P6  Rno-Mir-202  Sha-Mir-202  Spt-Mir-202  Sto-Mir-202  Tgu-Mir-202  Tni-Mir-202  Xla-Mir-202-P3  Xla-Mir-202-P4  Xtr-Mir-202-P1  Xtr-Mir-202-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Gallus_gallus.GRCg6a)		 6: 22456120-22456177 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCACAUCUUGAUUUGGCUCGUUGUUCCUUUUUCCUAUGCAUAUACUUCUUUGAGAGUUUGAUCUAAAGAGGCAUAGAGCAUGGGAAAAUGGGGCGACUGAGGUACUCCGCCAUUCAUU
Get precursor sequence
Structure
        10          20        30        40         50        
CCACAUCUUGAUUUGGCUC--        U           A-|  A       GAGAGU 
                     GUUGUUCC UUUUCCUAUGC  UAU CUUCUUU      \
                     CAGCGGGG AAAAGGGUACG  AUA GGAGAAA      U
UUACUUACCGCCUCAUGGAGU        U           AG^  C       UCUAGU 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ad Ad Br Br Ce Ce Ce Ce Gg He He Hy Hy Ki Ki Li Li Lu Lu Ov Pr Pr Sc Sc Sp Sp Te
Mature sequence

Gga-Mir-202_5p
mirBase accessionMIMAT0003354
Sequence 
0- UUCCUAUGCAUAUACUUCUUU -21
Get sequence
Proposed targets TargetScanVert: gga-miR-202-5p
miRDB: MIMAT0003354
Star sequence

Gga-Mir-202_3p*
mirBase accessionMIMAT0003355
Sequence 
36- AGAGGCAUAGAGCAUGGGAAAA -58
Get sequence
Proposed targets TargetScanVert: gga-miR-202-3p
miRDB: MIMAT0003355