| MirGeneDB ID | Pab-Mir-202 |
|---|---|
| Family name | MIR-202 (all species) |
| Seed | UCCUAUG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-202 Ami-Mir-202 Bta-Mir-202 Cfa-Mir-202 Cja-Mir-202 Cli-Mir-202 Cmi-Mir-202 Cpi-Mir-202 Cpo-Mir-202 Dno-Mir-202 Dre-Mir-202 Ebu-Mir-202 Eca-Mir-202 Ete-Mir-202 Gga-Mir-202 Gja-Mir-202 Gmo-Mir-202 Hsa-Mir-202 Laf-Mir-202 Lch-Mir-202 Loc-Mir-202 Mal-Mir-202 Mml-Mir-202 Mmr-Mir-202 Mmu-Mir-202 Mun-Mir-202 Neu-Mir-202 Oan-Mir-202 Ocu-Mir-202 Pbv-Mir-202 Pma-Mir-202-P5 Pma-Mir-202-P6 Rno-Mir-202 Sha-Mir-202 Spt-Mir-202 Sto-Mir-202 Tgu-Mir-202 Tni-Mir-202 Xla-Mir-202-P3 Xla-Mir-202-P4 Xtr-Mir-202-P1 Xtr-Mir-202-P2 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054687.2: 140450251-140450308 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GCCCUCCGCAGAGCCGCCCGCCGUUCCUUUUUCCUAUGCAUAUACUUCUUUGAGGAUCUGGCCUAAAGAGGUAUAGGGCAUGGGAAAACGGGGCGGUCGGGUCCUCCCCAGCAGCACCGet precursor sequence |
| Structure | 10 20 30 40 50 GCCCUCCGCAGAGCCGC- - U A-| GAGGAU CCG CCGUUCC UUUUCCUAUGC UAUACUUCUUU \ GGC GGCGGGG AAAAGGGUACG AUAUGGAGAAA C CCACGACGACCCCUCCUG U C GG^ UCCGGU 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-202_5p |
| mirBase accession | None |
| Sequence |
0- UUCCUAUGCAUAUACUUCUUU -21
Get sequence
|
| Star sequence | Pab-Mir-202_3p* |
| mirBase accession | None |
| Sequence |
36- AGAGGUAUAGGGCAUGGGAAAA -58
Get sequence
|
