MirGeneDB 3.0

MirGeneDB ID

Pbv-Mir-202

Family name MIR-202 (all species)
Seed UCCUAUG
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-202
Paralogues
Orthologues Aca-Mir-202  Ami-Mir-202  Bta-Mir-202  Cfa-Mir-202  Cja-Mir-202  Cli-Mir-202  Cmi-Mir-202  Cpi-Mir-202  Cpo-Mir-202  Dno-Mir-202  Dre-Mir-202  Ebu-Mir-202  Eca-Mir-202  Ete-Mir-202  Gga-Mir-202  Gja-Mir-202  Gmo-Mir-202  Hsa-Mir-202  Laf-Mir-202  Lch-Mir-202  Loc-Mir-202  Mal-Mir-202  Mml-Mir-202  Mmr-Mir-202  Mmu-Mir-202  Mun-Mir-202  Neu-Mir-202  Oan-Mir-202  Ocu-Mir-202  Pab-Mir-202  Pma-Mir-202-P5  Pma-Mir-202-P6  Rno-Mir-202  Sha-Mir-202  Spt-Mir-202  Sto-Mir-202  Tgu-Mir-202  Tni-Mir-202  Xla-Mir-202-P3  Xla-Mir-202-P4  Xtr-Mir-202-P1  Xtr-Mir-202-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)
KE953372.1: 130143-130200 [-]
Precursor
(pre-Mir +30nt flank)
GGUUGCGUGUUUUCUGCUCGUCGUUCCUUUUUCCUAUGCAUAUACUUCUUUGAGAAUUGAAUCUAAAGAGGCAUACGGCAUGGGAAAAUGGGGCGAUUGAGGGGUAUCGUCACCCUAC
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Structure
        10          20        30        40         50        
GGUUGCGUGUUUUCUGC-  -        U           A-   A       -| GAA 
                  UC GUCGUUCC UUUUCCUAUGC  UAU CUUCUUU GA   U
                  AG UAGCGGGG AAAAGGGUACG  AUA GGAGAAA CU   U
CAUCCCACUGCUAUGGGG  U        U           GC   C       U^ AAG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
 +
To
Mature sequence

Pbv-Mir-202_5p

mirBase accessionMIMAT0039003
Sequence
0- UUCCUAUGCAUAUACUUCUUUGA -23
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Star sequence

Pbv-Mir-202_3p* (predicted)

mirBase accessionNone
Sequence
34- AAAGAGGCAUACGGCAUGGGAAAA -58
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