MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-202

Family name MIR-202 (all species)
Seed UCCUAUG
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-202  Ami-Mir-202  Bta-Mir-202  Cfa-Mir-202  Cja-Mir-202  Cli-Mir-202  Cmi-Mir-202  Cpi-Mir-202  Cpo-Mir-202  Dno-Mir-202  Dre-Mir-202  Ebu-Mir-202  Eca-Mir-202  Ete-Mir-202  Gga-Mir-202  Gmo-Mir-202  Hsa-Mir-202  Laf-Mir-202  Lch-Mir-202  Loc-Mir-202  Mal-Mir-202  Mml-Mir-202  Mmr-Mir-202  Mmu-Mir-202  Mun-Mir-202  Neu-Mir-202  Oan-Mir-202  Ocu-Mir-202  Pab-Mir-202  Pbv-Mir-202  Pma-Mir-202-P5  Pma-Mir-202-P6  Rno-Mir-202  Sha-Mir-202  Spt-Mir-202  Sto-Mir-202  Tgu-Mir-202  Tni-Mir-202  Xla-Mir-202-P3  Xla-Mir-202-P4  Xtr-Mir-202-P1  Xtr-Mir-202-P2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015176453.1: 2413340-2413397 [-]
Precursor
(pre-Mir +30nt flank)
CGAUUCUGCGAUUCUGCUCGUUGUUCCUUUUUCCUAUGCAUAUACUUCUUUGAGAAUUUGGUCUAAAGAGGCAUACGGCAUGGGAAAAUGGGGCGACUGAGGUGUUCCACCCACCAUC
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Structure
        10          20        30        40         50        
CGAUUCUGCGAUUCUGCUC--        U           A-|  A       GAGAAU 
                     GUUGUUCC UUUUCCUAUGC  UAU CUUCUUU      \
                     CAGCGGGG AAAAGGGUACG  AUA GGAGAAA      U
CUACCACCCACCUUGUGGAGU        U           GC^  C       UCUGGU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Gja-Mir-202_5p
mirBase accessionNone
Sequence 
0- UUCCUAUGCAUAUACUUCUUU -21
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Star sequence

Gja-Mir-202_3p*
mirBase accessionNone
Sequence 
36- AGAGGCAUACGGCAUGGGAAAA -58
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