MirGeneDB 2.1
MirGeneDB ID

Gja-Let-7-P2a3

Family name LET-7 (all species)
Seed GAGGUAG
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Let-7-P1b  Gja-Let-7-P1c  Gja-Let-7-P1d  Gja-Let-7-P2a1  Gja-Let-7-P2a2  Gja-Let-7-P2a4  Gja-Let-7-P2b1  Gja-Let-7-P2b2  Gja-Let-7-P2b3  Gja-Let-7-P2b4  Gja-Let-7-P2c1  Gja-Let-7-P2c2  Gja-Let-7-P2c3 
Orthologues Aae-Let-7  Aca-Let-7-P2a3  Ami-Let-7-P2a3  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P2a3  Cfa-Let-7-P2a3  Cgi-Let-7  Cpi-Let-7-P2a3  Cpo-Let-7-P2a3  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P2a3  Dpu-Let-7  Dre-Let-7-P2a3a  Dre-Let-7-P2a3b  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P2a3  Gmo-Let-7-P2a3a  Gmo-Let-7-P2a3b  Hme-Let-7  Hsa-Let-7-P2a3  Isc-Let-7  Lan-Let-7  Lch-Let-7-P2a3  Lgi-Let-7  Loc-Let-7-P2a3  Mal-Let-7-P2a3a  Mal-Let-7-P2a3b  Mdo-Let-7-P2a3  Mml-Let-7-P2a3  Mmu-Let-7-P2a3  Mun-Let-7-P2a3  Npo-Let-7  Oan-Let-7-P2a3  Obi-Let-7  Ocu-Let-7-P2a3  Ovu-Let-7  Pbv-Let-7-P2a3  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P2a3  Sha-Let-7-P2a3  Sko-Let-7  Spt-Let-7-P2a3  Spu-Let-7  Sto-Let-7-P2a3  Tca-Let-7  Tgu-Let-7-P2a3  Tni-Let-7-P2a3a  Tni-Let-7-P2a3b  Xbo-Let-7  Xla-Let-7-P2a3d  Xtr-Let-7-P2a3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015173237.1: 127969-128039 [+]
Precursor
(pre-Mir +30nt flank)
AUGCCGACGUCGUUCUCCGACCUCCUGGGAUGAGGUAGUAGAUUGUAUAGUUUUAGGGUCAUACCCGGUCUUGGAGAUAACUAUACAGUCUACUGUCUUUCCCGUGGGGAUUCCCAGUUCUUCGUGCCGGC
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Structure
        10        20          30        40        50        60     
AUGCCGACGUCGUUCUCCGA--|   C     U   GU                UUAGGGUCAUAC 
                      CCUC UGGGA GAG  AGUAGAUUGUAUAGUU            C
                      GGGG GCCCU UUC  UCAUCUGACAUAUCAA            C
CGGCCGUGCUUCUUGACCCUUA^   U     -   UG                UAGAGGUUCUGG 
 .       120       110       100         90        80        70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
To
Mature sequence

Gja-Let-7-P2a3_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGUAGAUUGUAUAGUU -22
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Star sequence

Gja-Let-7-P2a3_3p*
mirBase accessionNone
Sequence 
50- CUAUACAGUCUACUGUCUUUC -71
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