MirGeneDB 2.1
MirGeneDB ID

Cfa-Let-7-P2a3

Family name LET-7 (all species)
Seed GAGGUAG
Species Dog (Canis familiaris)
MiRBase ID
Paralogues Cfa-Let-7-P1b  Cfa-Let-7-P1c  Cfa-Let-7-P1d  Cfa-Let-7-P2a1  Cfa-Let-7-P2a2  Cfa-Let-7-P2b1  Cfa-Let-7-P2b2  Cfa-Let-7-P2b3  Cfa-Let-7-P2c1  Cfa-Let-7-P2c2  Cfa-Let-7-P2c3 
Orthologues Aae-Let-7  Aca-Let-7-P2a3  Ami-Let-7-P2a3  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P2a3  Cgi-Let-7  Cpi-Let-7-P2a3  Cpo-Let-7-P2a3  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P2a3  Dpu-Let-7  Dre-Let-7-P2a3a  Dre-Let-7-P2a3b  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P2a3  Gja-Let-7-P2a3  Gmo-Let-7-P2a3a  Gmo-Let-7-P2a3b  Hme-Let-7  Hsa-Let-7-P2a3  Isc-Let-7  Lan-Let-7  Lch-Let-7-P2a3  Lgi-Let-7  Loc-Let-7-P2a3  Mal-Let-7-P2a3a  Mal-Let-7-P2a3b  Mdo-Let-7-P2a3  Mml-Let-7-P2a3  Mmu-Let-7-P2a3  Mun-Let-7-P2a3  Npo-Let-7  Oan-Let-7-P2a3  Obi-Let-7  Ocu-Let-7-P2a3  Ovu-Let-7  Pbv-Let-7-P2a3  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P2a3  Sha-Let-7-P2a3  Sko-Let-7  Spt-Let-7-P2a3  Spu-Let-7  Sto-Let-7-P2a3  Tca-Let-7  Tgu-Let-7-P2a3  Tni-Let-7-P2a3a  Tni-Let-7-P2a3b  Xbo-Let-7  Xla-Let-7-P2a3d  Xtr-Let-7-P2a3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(canFam3_add)		 chrX: 45254537-45254607 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUGAAGAUGAACACUGGUGCUCUGUGGGAUGAGGUAGUAGAUUGUAUAGUUUUAGGGUCAUACCCCAUCUUGGAGAUAACUAUACAGUCUACUGUCUUUCCCACGGUGGUACACUUCCCCUCCGACGUUC
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Structure
        10         20         30        40        50        60     
GCUGAAGAUGAACACUG-     -|       U   GU                UUAGGGUCAUAC 
                  GUGCU CUGUGGGA GAG  AGUAGAUUGUAUAGUU            C
                  CAUGG GGCACCCU UUC  UCAUCUGACAUAUCAA            C
CUUGCAGCCUCCCCUUCA     U^       -   UG                UAGAGGUUCUAC 
 .       120       110       100         90        80        70
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Ce Co He Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Let-7-P2a3_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGUAGAUUGUAUAGUU -22
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Star sequence

Cfa-Let-7-P2a3_3p*
mirBase accessionNone
Sequence 
50- CUAUACAGUCUACUGUCUUUC -71
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