MirGeneDB 3.0
MirGeneDB ID

Laf-Let-7-P2b3

Family name LET-7 (all species)
Seed GAGGUAG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Let-7-P1b  Laf-Let-7-P1c  Laf-Let-7-P1d  Laf-Let-7-P2a1  Laf-Let-7-P2a2  Laf-Let-7-P2a3  Laf-Let-7-P2b1  Laf-Let-7-P2b2  Laf-Let-7-P2c1  Laf-Let-7-P2c2  Laf-Let-7-P2c3 
Orthologues Aae-Let-7  Aca-Let-7-P2b3  Aga-Let-7  Agr-Let-7  Ami-Let-7-P2b3  Bge-Let-7  Bko-Let-7  Bpl-Let-7  Bta-Let-7-P2b3  Cfa-Let-7-P2b3  Cja-Let-7-P2b3  Cpi-Let-7-P2b3  Cpo-Let-7-P2b3  Cte-Let-7  Dan-Let-7  Dlo-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P2b3  Dpu-Let-7  Dre-Let-7-P2b3a  Dsi-Let-7  Dya-Let-7  Eba-Let-7  Eca-Let-7-P2b3  Egr-Let-7  Esc-Let-7  Ete-Let-7-P2b3  Gja-Let-7-P2b3  Gmo-Let-7-P2b3a  Gmo-Let-7-P2b3b  Gpa-Let-7  Gsa-Let-7  Gsp-Let-7  Hme-Let-7  Hmi-Let-7  Hru-Let-7  Hsa-Let-7-P2b3  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Lhy-Let-7  Llo-Let-7  Loc-Let-7-P2b3  Mal-Let-7-P2b3a  Mgi-Let-7  Mml-Let-7-P2b3  Mmr-Let-7-P2b3  Mmu-Let-7-P2b3  Mom-Let-7  Mun-Let-7-P2b3  Npo-Let-7  Oan-Let-7-P2b3  Obi-Let-7  Ocu-Let-7-P2b3  Ofu-Let-7  Ovu-Let-7  Pab-Let-7-P2b3  Pau-Let-7  Pbv-Let-7-P2b3  Pca-Let-7  Pcr-Let-7  Pdu-Let-7  Pfl-Let-7  Ple-Let-7  Pmi-Let-7  Pve-Let-7  Rno-Let-7-P2b3  Rph-Let-7  Sko-Let-7  Sma-Let-7  Sne-Let-7  Snu-Let-7  Spt-Let-7-P2b3  Spu-Let-7  Sro-Let-7  Sto-Let-7-P2b3  Tca-Let-7  Tni-Let-7-P2b3a  Tni-Let-7-P2b3b  Tur-Let-7  War-Let-7  Xbo-Let-7  Xla-Let-7-P2b3c  Xla-Let-7-P2b3d  Xtr-Let-7-P2b3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010112.1: 1927488-1927566 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUGCUAGAGAAUUCUGCUCAUGCCGGAGUGAGGUAGUAAGUUGUAUUGUUGUGGGGUAGGGAUUUUAGGCCCCAAUUAGAAGAUAACUAUACAACCUACUACUUUCCCUGGUGUGUGGCAUAUUCACAUUUAGCCUU
Get precursor sequence
Structure
        10         20         30        40        50        60         
UCUUGCUAGAGAAUUCU-   -|       AGU         A       U   GUGGGGUAGGGAUUUU 
                  GCU CAUGCCGG   GAGGUAGUA GUUGUAU GUU                A
                  CGG GUGUGGUC   UUUCAUCAU CAACAUA CAA                G
UUCCGAUUUACACUUAUA   U^       CC-         C       U   UAGAAGAUUAACCCCG 
       130       120       110        100        90        80        70
Deep sequencing
3' NTU Yes
MotifsUG at 5p(-14), UGUG in loop
Mature sequence

Laf-Let-7-P2b3_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGUAAGUUGUAUUGUU -22
Get sequence
Star sequence

Laf-Let-7-P2b3_3p*
mirBase accessionNone
Sequence 
58- CUAUACAACCUACUACUUUCC -79
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