MirGeneDB 2.1
MirGeneDB ID

Dre-Let-7-P2b3a

Family name LET-7 (all species)
Seed GAGGUAG
Species Zebrafish (Danio rerio)
MiRBase ID dre-let-7h
Paralogues Dre-Let-7-P1b1  Dre-Let-7-P1b2  Dre-Let-7-P1c1  Dre-Let-7-P1c2  Dre-Let-7-P1d1  Dre-Let-7-P1d2  Dre-Let-7-P2a1a  Dre-Let-7-P2a2a  Dre-Let-7-P2a2b  Dre-Let-7-P2a3a  Dre-Let-7-P2a3b  Dre-Let-7-P2a4a  Dre-Let-7-P2a4b  Dre-Let-7-P2b1a  Dre-Let-7-P2b2a  Dre-Let-7-P2b2b  Dre-Let-7-P2b4a  Dre-Let-7-P2b4b  Dre-Let-7-P2c2b  Dre-Let-7-P2c3 
Orthologues Aae-Let-7  Aca-Let-7-P2b3  Ami-Let-7-P2b3  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P2b3  Cfa-Let-7-P2b3  Cgi-Let-7  Cpi-Let-7-P2b3  Cpo-Let-7-P2b3  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P2b3  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P2b3  Gja-Let-7-P2b3  Gmo-Let-7-P2b3a  Gmo-Let-7-P2b3b  Hme-Let-7  Hsa-Let-7-P2b3  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Loc-Let-7-P2b3  Mal-Let-7-P2b3a  Mml-Let-7-P2b3  Mmu-Let-7-P2b3  Mun-Let-7-P2b3  Npo-Let-7  Oan-Let-7-P2b3  Obi-Let-7  Ocu-Let-7-P2b3  Ovu-Let-7  Pbv-Let-7-P2b3  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P2b3  Sko-Let-7  Spt-Let-7-P2b3  Spu-Let-7  Sto-Let-7-P2b3  Tca-Let-7  Tni-Let-7-P2b3a  Tni-Let-7-P2b3b  Xbo-Let-7  Xla-Let-7-P2b3c  Xla-Let-7-P2b3d  Xtr-Let-7-P2b3 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(danRer11)		 chr23: 28536683-28536763 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Let-7-P2b3a)		 Let-7-P2a3a chr23: 28536374-28536444 [+] UCSC Ensembl
Let-7-P2b3a chr23: 28536683-28536763 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGUUGUCGUCUGGAGUUGGCUGUGUUGUGGUGAGGUAGUAAGUUGUGUUGUUGUUGGGGAUCAGUAUAGUAUGGCCCUUGAAGGAGAUAACUAUACAAUUUACUGCCUUCCAUAAUGCAGACUCUCAAUCACACGUCCUGC
Get precursor sequence
Structure
        10          20        30        40        50        60        70
UGUUGUCGUCUGGAGUU-  -|          U                 U   GUUGGGGAUCAGUAUAG 
                  GG CUGUGUUGUGG GAGGUAGUAAGUUGUGU GUU                 U
                  UC GACGUAAUACC UUCCGUCAUUUAACAUA CAA                 A
CGUCCUGCACACUAACUC  A^          -                 U   UAGAGGAAGUUCCCGGU 
 .       130       120       110        100        90        80
Deep sequencing
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3' NTU Yes
MotifsUG at 5p(-14)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Let-7-P2b3a_5p
mirBase accessionMIMAT0001766
Sequence 
0- UGAGGUAGUAAGUUGUGUUGUU -22
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Proposed targets TargetScanFish: dre-let-7h
Star sequence

Dre-Let-7-P2b3a_3p*
mirBase accessionNone
Sequence 
60- CUAUACAAUUUACUGCCUUCC -81
Get sequence