MirGeneDB 3.0

MirGeneDB ID

Neu-Mir-103-P4

Family name MIR-103 (all species)
Seed GCAGCAU
Species Tammar Wallaby (Notamacropus eugenii)
MiRBase ID
Paralogues Neu-Mir-103-P2 
Orthologues Aca-Mir-103-P4  Ami-Mir-103-P4  Bta-Mir-103-P4  Cfa-Mir-103-P4  Cja-Mir-103-P4  Cli-Mir-103-P4  Cmi-Mir-103-P4  Cpi-Mir-103-P4  Cpo-Mir-103-P4  Dno-Mir-103-P4  Eca-Mir-103-P4  Ete-Mir-103-P4  Gga-Mir-103-P4  Gja-Mir-103-P4  Hmi-Mir-103  Hsa-Mir-103-P4  Laf-Mir-103-P4  Lch-Mir-103-P4  Loc-Mir-103-P4  Mdo-Mir-103-P4  Mml-Mir-103-P4  Mmr-Mir-103-P4  Mmu-Mir-103-P4  Mun-Mir-103-P4  Oan-Mir-103-P4  Ocu-Mir-103-P4  Pab-Mir-103-P4  Pbv-Mir-103-P4  Pfl-Mir-103  Pmi-Mir-103  Rno-Mir-103-P4  Sha-Mir-103-P4  Sko-Mir-103  Spt-Mir-103-P4  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P4  Tgu-Mir-103-P4  Xbo-Mir-103  Xla-Mir-103-P4  Xtr-Mir-103-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_028372415.1_mMacEug1.pri)
CM051813.1: 399789997-399790056 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGAACGUCUGGAAGAUUUCUUAUUGUCUUCGGCUUCUUUACAGUGCUGCCUUGUUGCAUAUGGAUCAAGCAGCAUUGUACAGGGCUAUGAAGGCACUGAGAUUUGCUCUUCAAAAAAAAA
Get precursor sequence
Structure
        10          20        30          40        50         
UGAACGUCUGGAAGAUU--     U       --|   U  U           CUUGUUGCA 
                   UCUUA UGUCUUC  GGCU CU UACAGUGCUGC         \
                   AGAGU ACGGAAG  UCGG GA AUGUUACGACG         U
AAAAAAAAACUUCUCGUUU     C       UA^   -  C           AACUAGGUA 
.       110       100        90         80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Br Ce Fi Li Mi Mi Mi Mi Mi Ov Se Se Te Te Te
Star sequence

Neu-Mir-103-P4_5p*

mirBase accessionNone
Sequence
0- GGCUUCUUUACAGUGCUGCCUU -22
Get sequence
Mature sequence

Neu-Mir-103-P4_3p

mirBase accessionNone
Sequence
37- AGCAGCAUUGUACAGGGCUAUGA -60
Get sequence