MirGeneDB 3.0
MirGeneDB ID

Xtr-Mir-103-P4

Family name MIR-103 (all species)
Seed GCAGCAU
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID xtr-mir-103-1
Paralogues Xtr-Mir-103-P1  Xtr-Mir-103-P2 
Orthologues Aca-Mir-103-P4  Ami-Mir-103-P4  Bta-Mir-103-P4  Cfa-Mir-103-P4  Cja-Mir-103-P4  Cli-Mir-103-P4  Cmi-Mir-103-P4  Cpi-Mir-103-P4  Cpo-Mir-103-P4  Dno-Mir-103-P4  Eca-Mir-103-P4  Ete-Mir-103-P4  Gga-Mir-103-P4  Gja-Mir-103-P4  Hmi-Mir-103  Hsa-Mir-103-P4  Laf-Mir-103-P4  Lch-Mir-103-P4  Loc-Mir-103-P4  Mdo-Mir-103-P4  Mml-Mir-103-P4  Mmr-Mir-103-P4  Mmu-Mir-103-P4  Mun-Mir-103-P4  Neu-Mir-103-P4  Oan-Mir-103-P4  Ocu-Mir-103-P4  Pab-Mir-103-P4  Pbv-Mir-103-P4  Pfl-Mir-103  Pmi-Mir-103  Rno-Mir-103-P4  Sha-Mir-103-P4  Sko-Mir-103  Spt-Mir-103-P4  Spu-Mir-103  Sro-Mir-103  Sto-Mir-103-P4  Tgu-Mir-103-P4  Xbo-Mir-103  Xla-Mir-103-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(xenTro9_add)		 chr3: 24141506-24141565 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGAAACACAUUAAUAUUCUCAUUUCCUUUGGCUUCUUUACAGUGCUGCCUUGUUGCAUAUGGAUCAAGCAGCAUUGUACAGGGCUAUGAAGGAUCUGAGAAAAACAUCACCUGAAAAGA
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Structure
        10          20        30          40        50         
GAGAAACACAUUAAUAU--     UU      --|   U  U           C   UUGCA 
                   UCUCA  UCCUUU  GGCU CU UACAGUGCUGC UUG     U
                   AGAGU  AGGAAG  UCGG GA AUGUUACGACG AAC     A
AGAAAAGUCCACUACAAAA     CU      UA^   -  C           -   UAGGU 
.       110       100        90         80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An Br Em Em He Ve
Star sequence

Xtr-Mir-103-P4_5p*
mirBase accessionNone
Sequence 
0- GGCUUCUUUACAGUGCUGCCUUG -23
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Mature sequence

Xtr-Mir-103-P4_3p
mirBase accessionMIMAT0003663
Sequence 
37- AGCAGCAUUGUACAGGGCUAUGA -60
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Proposed targets TargetScanVert: xtr-miR-103