MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-34-P2b

Family name MIR-34 (all species)
Seed GGCAGUG
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-34c
Paralogues Pbv-Mir-34-P1  Pbv-Mir-34-P2a  Pbv-Mir-34-P3a  Pbv-Mir-34-P3b  Pbv-Mir-34-P3c  Pbv-Mir-34-P3d 
Orthologues Aae-Mir-34  Aca-Mir-34-P2b  Aga-Mir-34  Agr-Mir-34  Ami-Mir-34-P2b  Asu-Mir-34  Bge-Mir-34  Bta-Mir-34-P2b  Cbr-Mir-34  Cel-Mir-34  Cfa-Mir-34-P2b  Cin-Mir-34  Cja-Mir-34-P2b  Cli-Mir-34-P2b  Cmi-Mir-34-P2b  Cpi-Mir-34-P2b  Cpo-Mir-34-P2b  Cte-Mir-34  Dan-Mir-34  Dlo-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dno-Mir-34-P2b  Dpu-Mir-34  Dre-Mir-34-P2b  Dsi-Mir-34  Dya-Mir-34  Ebu-Mir-34-P2b  Eca-Mir-34-P2b  Efe-Mir-34  Esc-Mir-34  Ete-Mir-34-P2b  Gga-Mir-34-P2b  Gja-Mir-34-P2b  Gpa-Mir-34  Gsp-Mir-34  Hmi-Mir-34  Hru-Mir-34  Hsa-Mir-34-P2b  Isc-Mir-34  Laf-Mir-34-P2b  Lch-Mir-34-P2b  Lgi-Mir-34  Lhy-Mir-34  Llo-Mir-34  Loc-Mir-34-P2b  Mdo-Mir-34-P2b  Mgi-Mir-34  Mml-Mir-34-P2b  Mmr-Mir-34-P2b  Mmu-Mir-34-P2b  Mom-Mir-34  Mun-Mir-34-P2b  Npo-Mir-34  Oan-Mir-34-P2b  Obi-Mir-34  Ocu-Mir-34-P2b  Ofu-Mir-34  Ovu-Mir-34  Pab-Mir-34-P2b  Pau-Mir-34  Pca-Mir-34  Pdu-Mir-34  Pfl-Mir-34  Pmi-Mir-34  Pve-Mir-34  Rno-Mir-34-P2b  Rph-Mir-34  Sha-Mir-34-P2b  Sko-Mir-34  Snu-Mir-34  Spt-Mir-34-P2b  Spu-Mir-34  Sto-Mir-34-P2b  Tca-Mir-34  Tgu-Mir-34-P2b  Tur-Mir-34  War-Mir-34  Xla-Mir-34-P2b1a  Xla-Mir-34-P2b1b  Xla-Mir-34-P2b2a  Xla-Mir-34-P2b2b  Xtr-Mir-34-P2b1  Xtr-Mir-34-P2b2 
Node of Origin (locus) Vertebrata
Node of Origin (family) Bilateria
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE957210.1: 113018-113072 [+]
Clustered miRNAs
(< 50kb from Mir-34-P2b)		 Mir-34-P2a KE957210.1: 112293-112350 [+]
Mir-34-P2b KE957210.1: 113018-113072 [+]
Precursor
(pre-Mir +30nt flank)
GACCCAAGCCUGAACAUCAGCCUUGUCACCAGGCAGUGUAGUUAGCUGAUUGACAAAGGCAACAGUCGCUAACAACACAGCCAAGUGAAAAGGCUGCCUCUCCCUUGCAGCUCUC
Get precursor sequence
Structure
        10          20        30        40        50       
GACCCAAGCCUGAACAU--|      G    CA   A    A      U     ACAA 
                   CAGCCUU UCAC  GGC GUGU GUUAGC GAUUG    A
                   GUCGGAA AGUG  CCG CACA CAAUCG CUGAC    G
CUCUCGACGUUCCCUCUCC^      A    AA   A    A      -     AACG 
   110       100        90        80        70         60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Pbv-Mir-34-P2b_5p
mirBase accessionMIMAT0038887
Sequence 
0- AGGCAGUGUAGUUAGCUGAUUGA -23
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Star sequence

Pbv-Mir-34-P2b_3p* (predicted)
mirBase accessionMIMAT0038888
Sequence 
33- AGUCGCUAACAACACAGCCAAG -55
Get sequence