MirGeneDB 3.0
MirGeneDB ID

Pbv-Mir-34-P3a

Family name MIR-34 (all species)
Seed GGCAGUG
Species Burmese python (Python bivittatus)
MiRBase ID pbv-mir-449c
Paralogues Pbv-Mir-34-P1  Pbv-Mir-34-P2a  Pbv-Mir-34-P2b  Pbv-Mir-34-P3b  Pbv-Mir-34-P3c  Pbv-Mir-34-P3d 
Orthologues Aae-Mir-34  Aca-Mir-34-P3a  Aga-Mir-34  Agr-Mir-34  Ami-Mir-34-P3a  Asu-Mir-34  Bge-Mir-34  Bta-Mir-34-P3a  Cbr-Mir-34  Cel-Mir-34  Cin-Mir-34  Cja-Mir-34-P3a-v1  Cja-Mir-34-P3a-v2  Cli-Mir-34-P3a  Cmi-Mir-34-P3a  Cpi-Mir-34-P3a  Cpo-Mir-34-P3a  Cte-Mir-34  Dan-Mir-34  Dlo-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dno-Mir-34-P3a  Dpu-Mir-34  Dsi-Mir-34  Dya-Mir-34  Efe-Mir-34  Esc-Mir-34  Gga-Mir-34-P3a  Gja-Mir-34-P3a  Gpa-Mir-34  Gsp-Mir-34  Hmi-Mir-34  Hru-Mir-34  Hsa-Mir-34-P3a-v1  Hsa-Mir-34-P3a-v2  Isc-Mir-34  Lch-Mir-34-P3a  Lgi-Mir-34  Lhy-Mir-34  Llo-Mir-34  Loc-Mir-34-P3a  Mgi-Mir-34  Mmu-Mir-34-P3a  Mom-Mir-34  Mun-Mir-34-P3a  Npo-Mir-34  Oan-Mir-34-P3a  Obi-Mir-34  Ocu-Mir-34-P3a  Ofu-Mir-34  Ovu-Mir-34  Pab-Mir-34-P3a  Pau-Mir-34  Pca-Mir-34  Pdu-Mir-34  Pfl-Mir-34  Pma-Mir-34-P3  Pmi-Mir-34  Pve-Mir-34  Rno-Mir-34-P3a  Rph-Mir-34  Sko-Mir-34  Snu-Mir-34  Spu-Mir-34  Sto-Mir-34-P3a  Tca-Mir-34  Tgu-Mir-34-P3a  Tur-Mir-34  War-Mir-34  Xla-Mir-34-P3a1  Xla-Mir-34-P3a2  Xtr-Mir-34-P3a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000186305.2_Python_molurus_bivittatus)		 KE953060.1: 287069-287134 [-]
Clustered miRNAs
(< 50kb from Mir-34-P3a)		 Mir-34-P3d KE953060.1: 284984-285043 [-]
Mir-34-P3c KE953060.1: 285891-285952 [-]
Mir-34-P3b KE953060.1: 286014-286074 [-]
Mir-34-P3a KE953060.1: 287069-287134 [-]
Precursor
(pre-Mir +30nt flank)
UUUGAAAAUGAGAAGAGAUGUGUGUCACUUUGGCAGUGCAGUACUAGCUGGCUGUUUGGAUACCUUCUGUGUUACAGCAGCUGGUUGCACUCCAGAGUGCUGCAUUCCAAUGCGCUGCAGAAAUAA
Get precursor sequence
Structure
        10          20        30        40        50        60    
UUUGAAAAUGAGAAGAGAU--|    U        C      GU        G    UUGGAUAC 
                     GUGUG CACUUUGG AGUGCA  ACUAGCUG CUGU        C
                     UACGU GUGAGACC UCACGU  UGGUCGAC GACA        U
AAUAAAGACGUCGCGUAACCU^    C        -      --        -    UUGUGUCU 
    120       110       100         90          80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Pbv-Mir-34-P3a_5p
mirBase accessionMIMAT0039054
Sequence 
0- UGGCAGUGCAGUACUAGCUGGCUGUU -26
Get sequence
Star sequence

Pbv-Mir-34-P3a_3p*
mirBase accessionNone
Sequence 
44- CAGCAGCUGGUUGCACUCCAGA -66
Get sequence