MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-34-P3a

Family name MIR-34 (all species)
Seed GGCAGUG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues Pab-Mir-34-P1  Pab-Mir-34-P2a  Pab-Mir-34-P2b  Pab-Mir-34-P3b  Pab-Mir-34-P3c 
Orthologues Aae-Mir-34  Aca-Mir-34-P3a  Aga-Mir-34  Agr-Mir-34  Ami-Mir-34-P3a  Asu-Mir-34  Bge-Mir-34  Bta-Mir-34-P3a  Cbr-Mir-34  Cel-Mir-34  Cin-Mir-34  Cja-Mir-34-P3a-v1  Cja-Mir-34-P3a-v2  Cli-Mir-34-P3a  Cmi-Mir-34-P3a  Cpi-Mir-34-P3a  Cpo-Mir-34-P3a  Cte-Mir-34  Dan-Mir-34  Dlo-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dno-Mir-34-P3a  Dpu-Mir-34  Dsi-Mir-34  Dya-Mir-34  Eca-Mir-34-P3a  Efe-Mir-34  Esc-Mir-34  Gga-Mir-34-P3a  Gja-Mir-34-P3a  Gpa-Mir-34  Gsp-Mir-34  Hmi-Mir-34  Hru-Mir-34  Hsa-Mir-34-P3a-v1  Hsa-Mir-34-P3a-v2  Isc-Mir-34  Lch-Mir-34-P3a  Lgi-Mir-34  Lhy-Mir-34  Llo-Mir-34  Loc-Mir-34-P3a  Mgi-Mir-34  Mmr-Mir-34-P3a  Mmu-Mir-34-P3a  Mom-Mir-34  Mun-Mir-34-P3a  Npo-Mir-34  Oan-Mir-34-P3a  Obi-Mir-34  Ocu-Mir-34-P3a  Ofu-Mir-34  Ovu-Mir-34  Pau-Mir-34  Pbv-Mir-34-P3a  Pca-Mir-34  Pdu-Mir-34  Pfl-Mir-34  Pma-Mir-34-P3  Pmi-Mir-34  Pve-Mir-34  Rno-Mir-34-P3a  Rph-Mir-34  Sko-Mir-34  Snu-Mir-34  Spu-Mir-34  Sto-Mir-34-P3a  Tca-Mir-34  Tgu-Mir-34-P3a  Tur-Mir-34  War-Mir-34  Xla-Mir-34-P3a1  Xla-Mir-34-P3a2  Xtr-Mir-34-P3a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054683.2: 64274461-64274521 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCAAUGGAUAAAGCUGGGAUGUGUCAGGUAGGCAGUGUAUUGCUAGCGGCUGUUAAUAAAAUUUUAACAGUUGCUAGUUGCACUCUCUGUUGCAUUCAGAAGCACGCCCCCCAAAGAAAU
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Structure
        10              20        30        40        50        60 
AGCAAUGGAUAAAGCUG------|      U   GUA  C      UU             AAUAA 
                       GGAUGUG CAG   GG AGUGUA  GCUAGCGGCUGUU     \
                       CUUACGU GUC   UC UCACGU  UGAUCGUUGACAA     A
UAAAGAAACCCCCCGCACGAAGA^      U   ---  -      --             UUUUA 
 .       110       100        90            80          70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Mature sequence

Pab-Mir-34-P3a_5p (predicted)
mirBase accessionNone
Sequence 
0- AGGCAGUGUAUUGCUAGCGGCUGUU -25
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Star sequence

Pab-Mir-34-P3a_3p* (predicted)
mirBase accessionNone
Sequence 
38- CAGUUGCUAGUUGCACUCUCUGU -61
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