MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-34-P3a

Family name MIR-34 (all species)
Seed GGCAGUG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-449c
Paralogues Dno-Mir-34-P1  Dno-Mir-34-P2a  Dno-Mir-34-P2b  Dno-Mir-34-P3b  Dno-Mir-34-P3c 
Orthologues Aae-Mir-34  Aca-Mir-34-P3a  Aga-Mir-34  Agr-Mir-34  Ami-Mir-34-P3a  Asu-Mir-34  Bge-Mir-34  Bta-Mir-34-P3a  Cbr-Mir-34  Cel-Mir-34  Cin-Mir-34  Cja-Mir-34-P3a-v1  Cja-Mir-34-P3a-v2  Cli-Mir-34-P3a  Cmi-Mir-34-P3a  Cpi-Mir-34-P3a  Cpo-Mir-34-P3a  Cte-Mir-34  Dan-Mir-34  Dlo-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dpu-Mir-34  Dsi-Mir-34  Dya-Mir-34  Efe-Mir-34  Esc-Mir-34  Gga-Mir-34-P3a  Gja-Mir-34-P3a  Gpa-Mir-34  Gsp-Mir-34  Hmi-Mir-34  Hru-Mir-34  Hsa-Mir-34-P3a-v1  Hsa-Mir-34-P3a-v2  Isc-Mir-34  Lch-Mir-34-P3a  Lgi-Mir-34  Lhy-Mir-34  Llo-Mir-34  Loc-Mir-34-P3a  Mgi-Mir-34  Mmu-Mir-34-P3a  Mom-Mir-34  Mun-Mir-34-P3a  Npo-Mir-34  Oan-Mir-34-P3a  Obi-Mir-34  Ocu-Mir-34-P3a  Ofu-Mir-34  Ovu-Mir-34  Pab-Mir-34-P3a  Pau-Mir-34  Pbv-Mir-34-P3a  Pca-Mir-34  Pdu-Mir-34  Pfl-Mir-34  Pma-Mir-34-P3  Pmi-Mir-34  Pve-Mir-34  Rno-Mir-34-P3a  Rph-Mir-34  Sko-Mir-34  Snu-Mir-34  Spu-Mir-34  Sto-Mir-34-P3a  Tca-Mir-34  Tgu-Mir-34-P3a  Tur-Mir-34  War-Mir-34  Xla-Mir-34-P3a1  Xla-Mir-34-P3a2  Xtr-Mir-34-P3a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(dasNov3)		 JH582746: 1407143-1407205 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-34-P3a)		 Mir-34-P3c JH582746: 1406026-1406087 [-] UCSC Ensembl
Mir-34-P3a JH582746: 1407143-1407205 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCAAAGAUGAAGCCUGGGUGUGUCAGGUAGGCAGUGCUUUGCUAGCUGGCUGUUAUAAUUUUAUUUUAACAGUUGCUAGUUGCACUCCCCUCUGUUGCAUUCAAAAGCAUUCUCCCCAAAG
Get precursor sequence
Structure
        10          20        30        40        50        60   
CAGCAAAGAUGAAGCCU--|      U    UA  C     UUU      U       AUAAUU 
                   GGGUGUG CAGG  GG AGUGC   GCUAGC GGCUGUU      \
                   CUUACGU GUCU  CC UCACG   UGAUCG UUGACAA      U
GAAACCCCUCUUACGAAAA^      U    CC  -     U--      -       UUUUAU 
 120       110       100        90           80         70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14)
Tissue expression
-   +
To
Mature sequence

Dno-Mir-34-P3a_5p
mirBase accessionMIMAT0047895
Sequence 
0- AGGCAGUGCUUUGCUAGCUGGCUGUU -26
Get sequence
Star sequence

Dno-Mir-34-P3a_3p* (predicted)
mirBase accessionMIMAT0047896
Sequence 
41- CAGUUGCUAGUUGCACUCCCCU -63
Get sequence