MirGeneDB 2.1
MirGeneDB ID

Tgu-Mir-34-P3c

Family name MIR-34 (all species)
Seed GGCAGUG
Species Zebra finch (Taeniopygia guttata)
MiRBase ID
Paralogues Tgu-Mir-34-P1  Tgu-Mir-34-P2a  Tgu-Mir-34-P2b  Tgu-Mir-34-P3a  Tgu-Mir-34-P3d 
Orthologues Aae-Mir-34  Aca-Mir-34-P3c  Ami-Mir-34-P3c  Asu-Mir-34  Bge-Mir-34  Bta-Mir-34-P3c  Cbr-Mir-34  Cel-Mir-34  Cfa-Mir-34-P3c  Cgi-Mir-34  Cin-Mir-34  Cli-Mir-34-P3c  Cmi-Mir-34-P3c  Cpi-Mir-34-P3c  Cpo-Mir-34-P3c  Cte-Mir-34  Dan-Mir-34  Dma-Mir-34  Dme-Mir-34  Dmo-Mir-34  Dno-Mir-34-P3c  Dpu-Mir-34  Dsi-Mir-34  Dya-Mir-34  Efe-Mir-34  Esc-Mir-34  Ete-Mir-34-P3c  Gga-Mir-34-P3c  Gja-Mir-34-P3c  Gmo-Mir-34-P3c  Hsa-Mir-34-P3c  Isc-Mir-34  Lgi-Mir-34  Loc-Mir-34-P3c  Mal-Mir-34-P3c  Mdo-Mir-34-P3c  Mml-Mir-34-P3c  Mmu-Mir-34-P3c  Npo-Mir-34  Oan-Mir-34-P3c  Obi-Mir-34  Ocu-Mir-34-P3c  Ovu-Mir-34  Pbv-Mir-34-P3c  Pfl-Mir-34  Pma-Mir-34-P3  Pmi-Mir-34  Rno-Mir-34-P3c  Sha-Mir-34-P3c  Sko-Mir-34  Spt-Mir-34-P3c  Spu-Mir-34  Sto-Mir-34-P3c  Tca-Mir-34  Tni-Mir-34-P3c  Xbo-Mir-34  Xla-Mir-34-P3c1  Xla-Mir-34-P3c2  Xtr-Mir-34-P3c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(TaeGut1_add)		 Z: 55412726-55412782 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUGCAGGUGGUGCAACUCUGUGUGAUGGGAUGGCAGUGUAUGUUGGCUGCUUGAAGUUCUGACAGCAGCUAACAUGCUGCUGCUCUCUCUUCCCACAUACCUUAGUCAUCAAAAUGG
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Structure
        10          20        30         40        50       
AUGCAGGUGGUGCAACUC--    U  U    U      -|             UGAAG 
                    UGUG GA GGGA GGCAGU GUAUGUUGGCUGCU     U
                    ACAC CU CUCU UCGUCG CGUACAAUCGACGA     U
GGUAAAACUACUGAUUCCAU    C  U    C      U^             CAGUC 
     110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Fe Fe Fe Fe Ma Ma Ma Ma
Mature sequence

Tgu-Mir-34-P3c_5p (predicted)
mirBase accessionNone
Sequence 
0- UGGCAGUGUAUGUUGGCUGCU -21
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Star sequence

Tgu-Mir-34-P3c_3p* (predicted)
mirBase accessionNone
Sequence 
35- CAGCUAACAUGCUGCUGCUCUC -57
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