MirGeneDB 2.1
MirGeneDB ID

Xla-Let-7-P2b2c

Family name LET-7 (all species)
Seed GAGGUAG
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Let-7-P1b3  Xla-Let-7-P1b4  Xla-Let-7-P1c3  Xla-Let-7-P1c4  Xla-Let-7-P2a1c  Xla-Let-7-P2a1d  Xla-Let-7-P2a2c  Xla-Let-7-P2a2d  Xla-Let-7-P2a3d  Xla-Let-7-P2b2d  Xla-Let-7-P2b3c  Xla-Let-7-P2b3d  Xla-Let-7-P2c2  Xla-Let-7-P2c3c  Xla-Let-7-P2c3d  Xla-Let-7-P2c4 
Orthologues Aae-Let-7  Aca-Let-7-P2b2  Ami-Let-7-P2b2  Bge-Let-7  Bpl-Let-7  Bta-Let-7-P2b2  Cfa-Let-7-P2b2  Cgi-Let-7  Cli-Let-7-P2b2  Cmi-Let-7-P2b2  Cpi-Let-7-P2b2  Cpo-Let-7-P2b2  Cte-Let-7  Dan-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dno-Let-7-P2b2  Dpu-Let-7  Dre-Let-7-P2b2a  Dre-Let-7-P2b2b  Dsi-Let-7  Dya-Let-7  Esc-Let-7  Ete-Let-7-P2b2  Gga-Let-7-P2b2  Gja-Let-7-P2b2  Gmo-Let-7-P2b2a  Hme-Let-7  Hsa-Let-7-P2b2  Isc-Let-7  Lan-Let-7  Lch-Let-7-P2b2  Lgi-Let-7  Loc-Let-7-P2b2  Mal-Let-7-P2b2a  Mal-Let-7-P2b2b  Mdo-Let-7-P2b2  Mml-Let-7-P2b2  Mmu-Let-7-P2b2  Mun-Let-7-P2b2  Npo-Let-7  Oan-Let-7-P2b2  Obi-Let-7  Ocu-Let-7-P2b2  Ovu-Let-7  Pbv-Let-7-P2b2  Pfl-Let-7  Pmi-Let-7  Rno-Let-7-P2b2  Sha-Let-7-P2b2  Sko-Let-7  Spt-Let-7-P2b2  Spu-Let-7  Sto-Let-7-P2b2  Tca-Let-7  Tgu-Let-7-P2b2  Tni-Let-7-P2b2a  Tni-Let-7-P2b2b  Xbo-Let-7  Xtr-Let-7-P2b2 
Node of Origin (locus) X. laevis
Node of Origin (family) Bilateria
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030728.1: 2407125-2407202 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUCUUUUGGCUGCGGCUGCCUUGCCGGGAUGAGGUAGUAGGUUGUGUGGUUUCAGGGCAGAGAUUUGUGCCCCAAUCAGGAGAUAACUAUACAACCUACUGCCUUCCCUGGUGGGCGCCAUGUCUGUGCCAAUCGGA
Get precursor sequence
Structure
        10         20         30        40        50        60         
CCUCUUUUGGCUGCGGCU-  -| UG     AU                     UCAGGGCAGAGAUUUG 
                   GC CU  CCGGG  GAGGUAGUAGGUUGUGUGGUU                \
                   CG GG  GGUCC  UUCCGUCAUCCAACAUAUCAA                U
AGGCUAACCGUGUCUGUAC  C^ GU     C-                     UAGAGGACUAACCCCG 
      130       120       110        100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Eg He Re St St St St
Mature sequence

Xla-Let-7-P2b2c_5p
mirBase accessionNone
Sequence 
0- UGAGGUAGUAGGUUGUGUGGUU -22
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Star sequence

Xla-Let-7-P2b2c_3p*
mirBase accessionNone
Sequence 
57- CUAUACAACCUACUGCCUUCC -78
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