MirGeneDB 3.0

15 microRNA genes with seed CUCACAC
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Bta-Mir-342 bta-mir-342 MIR-342 CUCACAC None MIMAT0003846 NC_037348.1 65057665 65057730 + Eutheria Eutheria No 1
Cfa-Mir-342 cfa-mir-342 MIR-342 CUCACAC None MIMAT0006709 chr8 68424654 68424720 + Eutheria Eutheria No 1
Cja-Mir-342 None MIR-342 CUCACAC None None CM021924.1 130940190 130940256 + Eutheria Eutheria No 1
Cpo-Mir-342 cpo-mir-342 MIR-342 CUCACAC MIMAT0047180 MIMAT0047181 scaffold_114 3985857 3985923 + Eutheria Eutheria No 1
Dno-Mir-342 dno-mir-342 MIR-342 CUCACAC MIMAT0047825 MIMAT0047826 JH561489 96895 96961 - Eutheria Eutheria No 1
Eca-Mir-342 eca-mir-342 MIR-342 CUCACAC MIMAT0013136 MIMAT0013137 CM009171.1 42491189 42491255 + Eutheria Eutheria No 1
Ete-Mir-342 None MIR-342 CUCACAC None None JH980297 83287203 83287269 - Eutheria Eutheria No 1
Hsa-Mir-342 hsa-mir-342 MIR-342 CUCACAC MIMAT0004694 MIMAT0000753 chr14 100109673 100109739 + Eutheria Eutheria No 1
Laf-Mir-342 None MIR-342 CUCACAC None None GL010036.1 76482842 76482908 - Eutheria Eutheria No 1
Mml-Mir-342 mml-mir-342 MIR-342 CUCACAC MIMAT0006282 MIMAT0006283 CM014342.1 162324317 162324383 + Eutheria Eutheria No 1
Mmr-Mir-342 mmr-mir-342 MIR-342 CUCACAC None MIMAT0049166 CM007663.1 10885935 10886001 + Eutheria Eutheria No 1
Mmu-Mir-342 mmu-mir-342 MIR-342 CUCACAC MIMAT0004653 MIMAT0000590 chr12 108658638 108658704 + Eutheria Eutheria No 1
Ocu-Mir-342 ocu-mir-342 MIR-342 CUCACAC MIMAT0048388 MIMAT0048389 chrUn0257 21272 21336 - Eutheria Eutheria No 1
Pab-Mir-342 None MIR-342 CUCACAC None None CM054694.2 104535707 104535773 + Eutheria Eutheria No 1
Rno-Mir-342 rno-mir-342 MIR-342 CUCACAC MIMAT0004652 MIMAT0000589 chr6 132561187 132561253 + Eutheria Eutheria No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all