MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-342

Family name MIR-342 (all species)
Seed CUCACAC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-342  Cfa-Mir-342  Cja-Mir-342  Cpo-Mir-342  Dno-Mir-342  Eca-Mir-342  Ete-Mir-342  Hsa-Mir-342  Mml-Mir-342  Mmr-Mir-342  Mmu-Mir-342  Ocu-Mir-342  Pab-Mir-342  Rno-Mir-342 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010036.1: 76482842-76482908 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUGAAGCCUGCGACCCUGGGCUCAAGGUGAGGGGUGCUAUCUGUGAUUGAGGGACAUGGUACAUAGAAUUGUCUCACACAGAAAUCGCACCCGUCUCCUUGGCCUGCUUAGCAACACCCCUCGACA
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Structure
        10           20        30        40          50        60   
UCUGAAGCCUGCGACCCU---    U     U  G      UA--|     AU     GACAUGGUA 
                     GGGC CAAGG GA GGGUGC    UCUGUG  UGAGG         \
                     UCCG GUUCC CU CCCACG    AGACAC  ACUCU         C
ACAGCUCCCCACAACGAUUCG    -     U  G      CUAA^     --     GUUAAGAUA 
     120       110        100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-342_5p*
mirBase accessionNone
Sequence 
0- AGGGGUGCUAUCUGUGAUUGAGG -23
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Mature sequence

Laf-Mir-342_3p
mirBase accessionNone
Sequence 
42- UCUCACACAGAAAUCGCACCCGUCU -67
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