MirGeneDB 3.0
MirGeneDB ID

Hsa-Mir-342

Family name MIR-342 (all species)
Seed CUCACAC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-342
Paralogues
Orthologues Bta-Mir-342  Cfa-Mir-342  Cja-Mir-342  Cpo-Mir-342  Dno-Mir-342  Eca-Mir-342  Ete-Mir-342  Laf-Mir-342  Mml-Mir-342  Mmr-Mir-342  Mmu-Mir-342  Ocu-Mir-342  Pab-Mir-342  Rno-Mir-342 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)		 chr14: 100109673-100109739 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGGCCAACCUGUGAAACUGGGCUCAAGGUGAGGGGUGCUAUCUGUGAUUGAGGGACAUGGUUAAUGGAAUUGUCUCACACAGAAAUCGCACCCGUCACCUUGGCCUACUUAUCACCACCCCAAACAG
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Structure
        10           20        30        40          50        60    
UGGCCAACCUGUGAAAC---     U        G      UA--|     AUUGA      UGGUUA 
                    UGGGC CAAGGUGA GGGUGC    UCUGUG     GGGACA      \
                    AUCCG GUUCCACU CCCACG    AGACAC     CUCUGU      A
GACAAACCCCACCACUAUUC     -        G      CUAA^     A----      UAAGGU 
     120       110        100        90        80            70
Deep sequencing
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CommentThe Drosha cut is supported by CAGE data (de Rie et al. 2017) although there is a second Drosha cut +1 on both arms and a second Dicer cut -4 on the 5p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Star sequence

Hsa-Mir-342_5p*
mirBase accessionMIMAT0004694
Sequence 
0- AGGGGUGCUAUCUGUGAUUGAGGGACA -27
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Proposed targets microrna.org: MIMAT0004694
TargetScanVert: hsa-miR-342-5p
TargetMiner: hsa-miR-342-5p
miRDB: MIMAT0004694
Mature sequence

Hsa-Mir-342_3p
mirBase accessionMIMAT0000753
Sequence 
42- UCUCACACAGAAAUCGCACCCGUCA -67
Get sequence
Proposed targets microrna.org: MIMAT0000753
TargetScanVert: hsa-miR-342-3p
TargetMiner: hsa-miR-342-3p
miRDB: MIMAT0000753