Mir-8-P2a

MirGeneDB ID

Dno-Mir-8-P2a

Family name

MIR-8 (all species)

Seed

AACACUG

Species

Nine-banded armadillo (Dasypus novemcinctus)

MiRBase ID

Paralogues

Dno-Mir-8-P1a Dno-Mir-8-P2b Dno-Mir-8-P3a

Orthologues

Aae-Mir-8 Aca-Mir-8-P2a Ami-Mir-8-P2a Asu-Mir-8 Bfl-Mir-8-P2 Bge-Mir-8 Bla-Mir-8-P2 Bpl-Mir-8 Bta-Mir-8-P2a Cbr-Mir-8 Cel-Mir-8 Cfa-Mir-8-P2a Cgi-Mir-8 Cin-Mir-8-P2 Cli-Mir-8-P2a Cmi-Mir-8-P2a Cpi-Mir-8-P2a Cpo-Mir-8-P2a Csc-Mir-8 Cte-Mir-8 Dan-Mir-8 Dma-Mir-8 Dme-Mir-8 Dmo-Mir-8 Dpu-Mir-8 Dre-Mir-8-P2a Dsi-Mir-8 Dya-Mir-8 Esc-Mir-8 Ete-Mir-8-P2a Gga-Mir-8-P2a Gja-Mir-8-P2a Gmo-Mir-8-P2a Hme-Mir-8 Hsa-Mir-8-P2a Isc-Mir-8 Lan-Mir-8 Lch-Mir-8-P2a Lgi-Mir-8 Loc-Mir-8-P2a Mal-Mir-8-P2a Mdo-Mir-8-P2a Mml-Mir-8-P2a Mmu-Mir-8-P2a Mun-Mir-8-P2a Npo-Mir-8 Oan-Mir-8-P2a Obi-Mir-8 Ocu-Mir-8-P2a Ovu-Mir-8 Pbv-Mir-8-P2a Pfl-Mir-8 Pmi-Mir-8 Rno-Mir-8-P2a Sha-Mir-8-P2a Sko-Mir-8 Spt-Mir-8-P2a Spu-Mir-8 Sto-Mir-8-P2a Tca-Mir-8 Tgu-Mir-8-P2a Tni-Mir-8-P2a Xla-Mir-8-P2a1 Xla-Mir-8-P2a2 Xtr-Mir-8-P2a

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Bilateria

Genome context
(dasNov3)

1755814140_name_237830476_mate_1755870925: 802-862 [+] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

UCCUCAGCCGCAGCACCUGGCCCCUGUGGGCAUCUUACUGGACAGUGCUGGACUUCUCAGCUCAGCUCUAACACUGUCUGGUAACGAUGUUCAAANNNNNNNNNNNNNNNNNNNNNNNNNN

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Structure

        10        20          30         40        50         
UCCUCAGCCGCAGCACCUGGCCCCUG--        -|   UG       C    CUUCUC 
                            UGGGCAUC UUAC  GACAGUG UGGA      A
                            ACUUGUAG AAUG  CUGUCAC AUCU      G
NNNNNNNNNNNNNNNNNNNNNNNNNNAA        C^   GU       A    CGACUC 
 .       110       100        90        80        70        60

Deep sequencing

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Comment

Not in assembly but in trace archive).

3' NTU

Motifs

Tissue expression

To

Star sequence

Dno-Mir-8-P2a_5p*

mirBase accession

None

Sequence

0- CAUCUUACUGGACAGUGCUGGA -22

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Mature sequence

Dno-Mir-8-P2a_3p

mirBase accession

None

Sequence

38- UAACACUGUCUGGUAACGAUGUU -61

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