| MirGeneDB ID | Spt-Mir-8-P2a |
|---|---|
| Family name | MIR-8 (all species) |
| Seed | AACACUG |
| Species | Tuatara (Sphenodon punctatus) |
| MiRBase ID | |
| Paralogues | Spt-Mir-8-P1a Spt-Mir-8-P3a |
| Orthologues | Aae-Mir-8 Aca-Mir-8-P2a Ami-Mir-8-P2a Asu-Mir-8 Bfl-Mir-8-P2 Bge-Mir-8 Bla-Mir-8-P2 Bpl-Mir-8 Bta-Mir-8-P2a Cbr-Mir-8 Cel-Mir-8 Cfa-Mir-8-P2a Cgi-Mir-8 Cin-Mir-8-P2 Cli-Mir-8-P2a Cmi-Mir-8-P2a Cpi-Mir-8-P2a Cpo-Mir-8-P2a Csc-Mir-8 Cte-Mir-8 Dan-Mir-8 Dma-Mir-8 Dme-Mir-8 Dmo-Mir-8 Dno-Mir-8-P2a Dpu-Mir-8 Dre-Mir-8-P2a Dsi-Mir-8 Dya-Mir-8 Esc-Mir-8 Ete-Mir-8-P2a Gga-Mir-8-P2a Gja-Mir-8-P2a Gmo-Mir-8-P2a Hme-Mir-8 Hsa-Mir-8-P2a Isc-Mir-8 Lan-Mir-8 Lch-Mir-8-P2a Lgi-Mir-8 Loc-Mir-8-P2a Mal-Mir-8-P2a Mdo-Mir-8-P2a Mml-Mir-8-P2a Mmu-Mir-8-P2a Mun-Mir-8-P2a Npo-Mir-8 Oan-Mir-8-P2a Obi-Mir-8 Ocu-Mir-8-P2a Ovu-Mir-8 Pbv-Mir-8-P2a Pfl-Mir-8 Pmi-Mir-8 Rno-Mir-8-P2a Sha-Mir-8-P2a Sko-Mir-8 Spu-Mir-8 Sto-Mir-8-P2a Tca-Mir-8 Tgu-Mir-8-P2a Tni-Mir-8-P2a Xla-Mir-8-P2a1 Xla-Mir-8-P2a2 Xtr-Mir-8-P2a |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Bilateria |
| Genome context (GCA_003113815.1_ASM311381v1_TUATARA) |
QEPC01009251.1: 396430-396490 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AUUGCUGAAUAAACUAUGGUCCUCUGUGGGCAUCUUACUAGACAGUGCUGGAUUUUUUGGAUCUACUCUAACACUGUCUGGUAACGAUGUUUAAAGGGUGAACCAAACUACUACGUUGAUCGet precursor sequence |
| Structure | 10 20 30 40 50 AUUGCUGAAUAAACUAUGG- - G -| C AUUUUUU UC CUCU UGGGCAUC UUACUAGACAGUG UGG G AG GGGA AUUUGUAG AAUGGUCUGUCAC AUC G CUAGUUGCAUCAUCAAACCA U A C^ A UCAUCUA . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Star sequence | Spt-Mir-8-P2a_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- CAUCUUACUAGACAGUGCUGG -21
Get sequence
|
| Mature sequence | Spt-Mir-8-P2a_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- UAACACUGUCUGGUAACGAUGUU -61
Get sequence
|
