MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-187

Family name MIR-187 (all species)
Seed CGUGUCU
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-187
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cja-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Eca-Mir-187  Ete-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Laf-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmr-Mir-187  Mmu-Mir-187  Mun-Mir-187  Neu-Mir-187  Oan-Mir-187  Ocu-Mir-187  Pab-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(danRer11)		 chr19: 34135627-34135688 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGACGAAGGUGACCUGUGGCUGGGCCAGGGGCUGCAACACAGGACAUGGGAGCUGUCUCUCACUCCCGCUCGUGUCUUGUGUUGCAGCCAGUGGAACGGCUACACUGUCCACAUCUGAGAC
Get precursor sequence
Structure
        10          20        30        40        50        60
GAGACGAAGGUGACCUG--|     GG   GG                     AGCUGUCU 
                   UGGCUG  CCA  GGCUGCAACACAGGACAUGGG        C
                   AUCGGC  GGU  CCGACGUUGUGUUCUGUGCUC        U
CAGAGUCUACACCUGUCAC^     AA   GA                     GCCCUCAC 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
CommentThe 3' end of the 3p arm is also monouridylated when not monoadenylated despite the templated uridine.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-187_5p*
mirBase accessionNone
Sequence 
0- GGCUGCAACACAGGACAUGGGA -22
Get sequence
Mature sequence

Dre-Mir-187_3p
mirBase accessionMIMAT0001274
Sequence 
40- UCGUGUCUUGUGUUGCAGCCAG -62
Get sequence
Proposed targets TargetScanFish: dre-miR-187