MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-187

Family name MIR-187 (all species)
Seed CGUGUCU
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cja-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Dre-Mir-187  Eca-Mir-187  Ete-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Laf-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmr-Mir-187  Mmu-Mir-187  Neu-Mir-187  Oan-Mir-187  Ocu-Mir-187  Pab-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(Mun_miRNA_loci)		 187_LR594632.1:228195332-228195588: 100-157 [+]
Precursor
(pre-Mir +30nt flank)
UAAUUUCCUGUGACUCAGUGUGAUACCUCCGGCUACAACACAGGACAUGAGAACUUUCUUGGACGCUCGUGUCUUGUGUUGCAGCCAGAGGGGCACAUCUUCUGAACAUGAGACAUCC
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Structure
        10           20        30        40        50        
UAAUUUCCUGUGACUCA---|    AUA    C    A                AACUUU 
                    GUGUG   CCUC GGCU CAACACAGGACAUGAG      C
                    UACAC   GGAG CCGA GUUGUGUUCUGUGCUC      U
CCUACAGAGUACAAGUCUUC^    GG-    A    C                GCAGGU 
      110       100         90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
To
Star sequence

Mun-Mir-187_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGCUACAACACAGGACAUGAGA -22
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Mature sequence

Mun-Mir-187_3p
mirBase accessionNone
Sequence 
36- UCGUGUCUUGUGUUGCAGCCAG -58
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