MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-187

Family name MIR-187 (all species)
Seed CGUGUCU
Species Human (Homo sapiens)
MiRBase ID hsa-mir-187
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Dre-Mir-187  Ete-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmu-Mir-187  Mun-Mir-187  Oan-Mir-187  Ocu-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(hg38)
chr18: 35904835-35904892 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGCUCACCAUGACACAGUGUGAGACCUCGGGCUACAACACAGGACCCGGGCGCUGCUCUGACCCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCAGGUCCGCAGCAGAGCCUGCUC
Get precursor sequence
Structure
        10           20        30        40        50        
GGGCUCACCAUGACACAG---|   AGA    G    A           C    CGCUGC 
                     UGUG   CCUC GGCU CAACACAGGAC CGGG      U
                     ACGC   GGAG CCGA GUUGUGUUCUG GCUC      C
CUCGUCCGAGACGACGCCUGG^   AG-    G    C           U    CCCAGU 
      110       100         90        80        70        60
Deep sequencing
Go to detailed chart
CommentThere is a second Drosha cut +1 on the 5p arm. The 3' end of the 3p arm is also likely monoadenylated when not monouridylated despite the templated adenosine.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Star sequence

Hsa-Mir-187_5p*

mirBase accessionMIMAT0004561
Sequence
0- GGCUACAACACAGGACCCGGGC -22
Get sequence
Proposed targets microrna.org: MIMAT0004561
TargetScanVert: hsa-miR-187-5p
TargetMiner: hsa-miR-187-5p
miRDB: MIMAT0004561
Mature sequence

Hsa-Mir-187_3p

mirBase accessionMIMAT0000262
Sequence
36- UCGUGUCUUGUGUUGCAGCCGG -58
Get sequence
Proposed targets microrna.org: MIMAT0000262
TargetScanVert: hsa-miR-187-3p
TargetMiner: hsa-miR-187-3p
miRDB: MIMAT0000262