MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-187

Family name MIR-187 (all species)
Seed CGUGUCU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cja-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Dre-Mir-187  Eca-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Laf-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmr-Mir-187  Mmu-Mir-187  Mun-Mir-187  Neu-Mir-187  Oan-Mir-187  Ocu-Mir-187  Pab-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(echTel2)		 JH980306: 26683463-26683520 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GGGCUCAAGGUGACACGAUGUGAGACCUUGGGCUACAACUCAGGACCCGGGCGCUGCUCCGACCCCUCGUGUCUUGUGUUGCAGCUGGAGGUACACAGAUCUGCAGCAGAGCCCGUGU
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Structure
        10           20        30        40        50        
GGGCUCAAGGUGACACGA---|   AG     G    A    U      C    CGCUGC 
                     UGUG  ACCUU GGCU CAAC CAGGAC CGGG      U
                     ACAC  UGGAG UCGA GUUG GUUCUG GCUC      C
UGUGCCCGAGACGACGUCUAG^   A-     G    C    U      U    CCCAGC 
      110       100         90        80        70        60
Deep sequencing
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CommentThere is a 1 nt polymorphism at position 20 on the 3p arm.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Ete-Mir-187_5p*
mirBase accessionNone
Sequence 
0- GGCUACAACUCAGGACCCGGGC -22
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Mature sequence

Ete-Mir-187_3p
mirBase accessionNone
Sequence 
36- UCGUGUCUUGUGUUGCAGCUGG -58
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