| MirGeneDB ID | Eca-Mir-187 |
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| Family name |
MIR-187 (all species) |
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| Seed |
CGUGUCU |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-187
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| Paralogues |
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| Orthologues |
Aca-Mir-187
Ami-Mir-187
Bta-Mir-187
Cfa-Mir-187
Cja-Mir-187
Cli-Mir-187
Cpi-Mir-187
Cpo-Mir-187
Dno-Mir-187
Dre-Mir-187
Ete-Mir-187
Gga-Mir-187
Gja-Mir-187
Gmo-Mir-187
Hsa-Mir-187
Laf-Mir-187
Lch-Mir-187
Loc-Mir-187
Mal-Mir-187
Mdo-Mir-187
Mml-Mir-187
Mmr-Mir-187
Mmu-Mir-187
Mun-Mir-187
Neu-Mir-187
Oan-Mir-187
Ocu-Mir-187
Pab-Mir-187
Rno-Mir-187
Sha-Mir-187
Spt-Mir-187
Tgu-Mir-187
Tni-Mir-187
Xtr-Mir-187
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| Node of Origin (locus) |
Osteichthyes
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| Node of Origin (family) |
Osteichthyes
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009155.1: 59511287-59511343 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GUGCCCGCAAGACACGGUGUGAGACCUCGGGCUACAACACGGGACCCGGGCGCUGCUCCGACCCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCAGGUCCGCAGCAGAGCCUGCUC
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GUGCCCGCAAGACACGG----| AGA G A C CGCUGC
UGUG CCUC GGCU CAACACGGGAC CGGG U
ACGC GGAG CCGA GUUGUGUUCUG GCUC C
CUCGUCCGAGACGACGCCUGG^ AG- G C U CCCAGC
110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
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| Comment | The 3' end of the 3p arm is also likely monoadenylated when not monouridylated despite the templated adenosine. |
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| 3' NTU |
Yes
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Star sequence |
Eca-Mir-187_5p* |
| mirBase accession | None |
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| Sequence |
0- GCUACAACACGGGACCCGGGCG -22
Get sequence
|
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| Mature sequence |
Eca-Mir-187_3p |
| mirBase accession | MIMAT0012999 |
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| Sequence |
35- UCGUGUCUUGUGUUGCAGCCGG -57
Get sequence
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