MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-187

Family name MIR-187 (all species)
Seed CGUGUCU
Species Horse (Equus caballus)
MiRBase ID eca-mir-187
Paralogues
Orthologues Aca-Mir-187  Ami-Mir-187  Bta-Mir-187  Cfa-Mir-187  Cja-Mir-187  Cli-Mir-187  Cpi-Mir-187  Cpo-Mir-187  Dno-Mir-187  Dre-Mir-187  Ete-Mir-187  Gga-Mir-187  Gja-Mir-187  Gmo-Mir-187  Hsa-Mir-187  Laf-Mir-187  Lch-Mir-187  Loc-Mir-187  Mal-Mir-187  Mdo-Mir-187  Mml-Mir-187  Mmr-Mir-187  Mmu-Mir-187  Mun-Mir-187  Neu-Mir-187  Oan-Mir-187  Ocu-Mir-187  Pab-Mir-187  Rno-Mir-187  Sha-Mir-187  Spt-Mir-187  Tgu-Mir-187  Tni-Mir-187  Xtr-Mir-187 
Node of Origin (locus) Osteichthyes
Node of Origin (family) Osteichthyes
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009155.1: 59511287-59511343 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGCCCGCAAGACACGGUGUGAGACCUCGGGCUACAACACGGGACCCGGGCGCUGCUCCGACCCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCAGGUCCGCAGCAGAGCCUGCUC
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Structure
        10            20        30        40        50       
GUGCCCGCAAGACACGG----|   AGA    G    A           C    CGCUGC 
                     UGUG   CCUC GGCU CAACACGGGAC CGGG      U
                     ACGC   GGAG CCGA GUUGUGUUCUG GCUC      C
CUCGUCCGAGACGACGCCUGG^   AG-    G    C           U    CCCAGC 
     110       100         90        80        70        60
Deep sequencing
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CommentThe 3' end of the 3p arm is also likely monoadenylated when not monouridylated despite the templated adenosine.
3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Star sequence

Eca-Mir-187_5p*
mirBase accessionNone
Sequence 
0- GCUACAACACGGGACCCGGGCG -22
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Mature sequence

Eca-Mir-187_3p
mirBase accessionMIMAT0012999
Sequence 
35- UCGUGUCUUGUGUUGCAGCCGG -57
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