MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-21

Family name MIR-21 (all species)
Seed AGCUUAU
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues
Orthologues Aca-Mir-21  Ami-Mir-21  Bta-Mir-21  Cfa-Mir-21  Cja-Mir-21  Cli-Mir-21  Cmi-Mir-21  Cpi-Mir-21  Cpo-Mir-21  Dno-Mir-21  Dre-Mir-21-P1  Dre-Mir-21-P2  Eca-Mir-21  Ete-Mir-21  Gga-Mir-21  Gja-Mir-21  Gmo-Mir-21-P1  Gmo-Mir-21-P2  Hsa-Mir-21  Laf-Mir-21  Lch-Mir-21  Loc-Mir-21  Mal-Mir-21-P1  Mal-Mir-21-P2  Mdo-Mir-21  Mml-Mir-21  Mmr-Mir-21  Mmu-Mir-21  Mun-Mir-21  Neu-Mir-21  Oan-Mir-21  Ocu-Mir-21  Pab-Mir-21  Pbv-Mir-21  Pma-Mir-21  Rno-Mir-21  Sha-Mir-21  Spt-Mir-21  Sto-Mir-21  Tgu-Mir-21  Tni-Mir-21-P1  Tni-Mir-21-P2  Xla-Mir-21-P3  Xla-Mir-21-P4  Xtr-Mir-21 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02010190.1: 6763374-6763432 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUCUUUGUUUACCACCUGGUGACGGCUAGCUAGCUUAUCAGACUGGUGUUUGUAUAAAAUACAUUGCAAACAACAGCUGAUAGGCCGGCUAUACGUUUCUUCCAACGACCCAUUCCAAA
Get precursor sequence
Structure
        10          20        30        40        50         
AUCUUUGUUUACCACCU--| U    GC    UA         A   G       AUAAA 
                   GG GACG  UAGC  GCUUAUCAG CUG UGUUUGU     A
                   UC UUGC  AUCG  CGGAUAGUC GAC ACAAACG     U
AAACCUUACCCAGCAACCU^ U    AU    GC         -   A       UUACA 
       110       100        90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Ebu-Mir-21_5p
mirBase accessionNone
Sequence 
0- UAGCUUAUCAGACUGGUGUUUGU -23
Get sequence
Star sequence

Ebu-Mir-21_3p* (predicted)
mirBase accessionNone
Sequence 
37- AAACAACAGCUGAUAGGCCGGC -59
Get sequence