MirGeneDB 3.0
MirGeneDB ID

Hme-Mir-9-P9

Family name MIR-9 (all species)
Seed UAAAGCU
Species Longwing butterfly (Heliconius melpomene)
MiRBase ID
Paralogues Hme-Mir-9-P10  Hme-Mir-9-P11  Hme-Mir-9-P12 
Orthologues Agr-Mir-9  Bfl-Mir-9  Bko-Mir-9  Bla-Mir-9  Bpl-Mir-9  Cin-Mir-9  Cte-Mir-9  Dan-Mir-9-P9  Dgr-Mir-9  Dlo-Mir-9-P9  Dma-Mir-9-P9  Dme-Mir-9-P9  Dmo-Mir-9-P9  Dpu-Mir-9-P9  Dsi-Mir-9-P9  Dya-Mir-9-P9  Eba-Mir-9  Egr-Mir-9  Esc-Mir-9  Gsa-Mir-9  Gsp-Mir-9  Hmi-Mir-9  Hru-Mir-9  Isc-Mir-9  Lan-Mir-9  Lgi-Mir-9  Llo-Mir-9  Mom-Mir-9  Npo-Mir-9  Obi-Mir-9  Ofu-Mir-9  Ovu-Mir-9  Pau-Mir-9  Pdu-Mir-9  Pmi-Mir-9  Pve-Mir-9  Rph-Mir-9  Sma-Mir-9  Snu-Mir-9  Spu-Mir-9  Tca-Mir-9-P9a  Tca-Mir-9-P9b-v1  Tca-Mir-9-P9b-v2  Tca-Mir-9-P9c-v1  Tca-Mir-9-P9c-v2  War-Mir-9  Xbo-Mir-9 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Bilateria
Genome context
(Hmel_1)		 HE671859: 114241-114299 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCUUUUCAGCAUAUUUCACUUUUCGUGUAUUUGGUGAUUCAGCUUAUGACGUUACAAUAUACGUUAUAAAGCUGUUUCACUAAAUGUACGCGUAGUGAAAUUCAACAAAUGGUGUAA
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Structure
        10          20        30        40         50        
UUUCUUUUCAGCAUAUU--     UUU              UU    -|     CGUUAC 
                   UCACU   CGUGUAUUUGGUGA  CAGC UUAUGA      A
                   AGUGA   GCAUGUAAAUCACU  GUCG AAUAUU      A
AAUGUGGUAAACAACUUAA     UGC              UU    A^     GCAUAU 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Fe Fe Fe Fe Ma Ma
Star sequence

Hme-Mir-9-P9_5p*
mirBase accessionNone
Sequence 
0- AUUUGGUGAUUCAGCUUAUGA -21
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Mature sequence

Hme-Mir-9-P9_3p
mirBase accessionNone
Sequence 
37- AUAAAGCUGUUUCACUAAAUGU -59
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