| MirGeneDB ID | Laf-Mir-147-P4 |
|---|---|
| Family name | MIR-147 (all species) |
| Seed | UGUGUGG |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-147-P5 |
| Orthologues | Bta-Mir-147 Cja-Mir-147 Cli-Mir-147 Cmi-Mir-147 Eca-Mir-147 Gga-Mir-147 Lch-Mir-147 Mdo-Mir-147 Mml-Mir-147 Mmr-Mir-147 Mmu-Mir-147 Neu-Mir-147 Oan-Mir-147 Ocu-Mir-147 Pab-Mir-147 Pma-Mir-147 Sha-Mir-147 Spt-Mir-147 Tgu-Mir-147 Tni-Mir-147 |
| Node of Origin (locus) | L. africana |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010027.1: 44031328-44031387 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UCUUUCUUCCGACAGAGUACUCUGGAUUUAGUGGAAACACUUCCGCACAAACUAGAUUAUGGAUACCAGUGUGUGGAAAUGCUUCUGCAACAUUUUUAGGGUUUGCCUACAUUUGGGACUGet precursor sequence |
| Structure | 10 20 30 40 50 UCUUUCUUCCGACAGAGU UUUA--|UG A C AACUAGAUU ACUCUGGA G GAA CA UUCCGCACA A UGGGAUUU C CUU GU AAGGUGUGU U UCAGGGUUUACAUCCGUU UUACAA^GU C A GACCAUAGG . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Laf-Mir-147-P4_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GUGGAAACACUUCCGCACAAACU -23
Get sequence
|
| Mature sequence | Laf-Mir-147-P4_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- GUGUGUGGAAAUGCUUCUGCAA -60
Get sequence
|
