| MirGeneDB ID | Pab-Mir-147 |
|---|---|
| Family name | MIR-147 (all species) |
| Seed | UGUGCGG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Aca-Mir-147-v1 Aca-Mir-147-v2 Ami-Mir-147-v1 Ami-Mir-147-v2 Bta-Mir-147 Cfa-Mir-147-P1-v1 Cfa-Mir-147-P1-v2 Cfa-Mir-147-P2-v1 Cfa-Mir-147-P2-v2 Cja-Mir-147 Cli-Mir-147 Cmi-Mir-147 Cpi-Mir-147-v1 Cpi-Mir-147-v2 Cpo-Mir-147-v1 Cpo-Mir-147-v2 Dno-Mir-147-v1 Dno-Mir-147-v2 Eca-Mir-147 Gga-Mir-147 Gja-Mir-147-P3a-v1 Gja-Mir-147-P3a-v2 Gja-Mir-147-P3b-v1 Gja-Mir-147-P3b-v2 Hsa-Mir-147-v1 Hsa-Mir-147-v2 Laf-Mir-147-P4 Laf-Mir-147-P5 Lch-Mir-147 Loc-Mir-147-v1 Loc-Mir-147-v2 Mal-Mir-147-v1 Mal-Mir-147-v2 Mdo-Mir-147 Mml-Mir-147 Mmr-Mir-147 Mmu-Mir-147 Neu-Mir-147 Oan-Mir-147 Ocu-Mir-147 Pbv-Mir-147-v1 Pbv-Mir-147-v2 Pma-Mir-147 Rno-Mir-147-v1 Rno-Mir-147-v2 Sha-Mir-147 Spt-Mir-147 Tgu-Mir-147 Tni-Mir-147 |
| Node of Origin (locus) | Vertebrata |
| Node of Origin (family) | Vertebrata |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054695.2: 48333987-48334046 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CUUUCUUCCGAAGAGUACUCUAUAAAUCUAGUGGAAACAUUUCUGCACAAACUAGAUUCUGGACACCAGUGUGCGGAAAUGCUUCUGCUACAUUUUUAGGGUUUGUCUACAUUUUUGGGGGet precursor sequence |
| Structure | 10 20 30 40 50 CUUUCUUCCGAAGAGUA--| U C UG A AACUAGAUU CUCUA AAAU UAG GAA CAUUUCUGCACA C GGGAU UUUA AUC CUU GUAAAGGCGUGU U GGGGUUUUUACAUCUGUUU^ U C GU C GACCACAGG . 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Pab-Mir-147_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GUGGAAACAUUUCUGCACAAACU -23
Get sequence
|
| Mature sequence | Pab-Mir-147_3p (predicted) |
| mirBase accession | None |
| Sequence |
38- GUGUGCGGAAAUGCUUCUGCUA -60
Get sequence
|
