MirGeneDB 2.1

MirGeneDB ID

Dno-Mir-147-v2

Family name MIR-147 (all species)
Seed GUGUGCG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-147
Paralogues Dno-Mir-147-v1 
Orthologues Aca-Mir-147-v2  Ami-Mir-147-v2  Bta-Mir-147  Cli-Mir-147  Cmi-Mir-147  Cpi-Mir-147-v2  Cpo-Mir-147-v2  Gga-Mir-147  Hsa-Mir-147-v2  Lch-Mir-147  Loc-Mir-147-v2  Mal-Mir-147-v2  Mdo-Mir-147  Mml-Mir-147  Mmu-Mir-147-v2  Oan-Mir-147  Ocu-Mir-147  Pbv-Mir-147-v2  Pma-Mir-147  Rno-Mir-147-v2  Spt-Mir-147  Tgu-Mir-147  Tni-Mir-147 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(dasNov3)
JH568452: 64919-64976 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-147-v2)
Mir-147-v1 JH568452: 64918-64977 [-] UCSC Ensembl
Mir-147-v2 JH568452: 64919-64976 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCUUCCAAAGAAUACUCUAUGAAUCUAGUGGAAACAUUUCUGCACAAACUAGAUUAUGGAUACCAGUGUGCGGAAAUGCUUCUGCUCCAUUUUUAGAGUUUGCCUACAUUUUUGGA
Get precursor sequence
Structure
        10          20        30        40        50        
UUUCUUCCAAAGAAUAC--|   U    CU  UG   A            AACUAGAUU 
                   UCUA GAAU  AG  GAA CAUUUCUGCACA         A
                   AGAU UUUA  UC  CUU GUAAAGGCGUGU         U
AGGUUUUUACAUCCGUUUG^   U    CC  GU   C            GACCAUAGG 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Star sequence

Dno-Mir-147-v2_5p*

mirBase accessionMIMAT0047667
Sequence
0- UGGAAACAUUUCUGCACAAACU -22
Get sequence
Mature sequence

Dno-Mir-147-v2_3p

mirBase accessionMIMAT0047668
Sequence
36- AGUGUGCGGAAAUGCUUCUGCU -58
Get sequence