MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-147-v2

Family name MIR-147 (all species)
Seed GUGUGCG
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-147
Paralogues Aca-Mir-147-v1 
Orthologues Ami-Mir-147-v2  Bta-Mir-147  Cja-Mir-147  Cli-Mir-147  Cmi-Mir-147  Cpi-Mir-147-v2  Cpo-Mir-147-v2  Dno-Mir-147-v2  Eca-Mir-147  Gga-Mir-147  Hsa-Mir-147-v2  Lch-Mir-147  Loc-Mir-147-v2  Mal-Mir-147-v2  Mdo-Mir-147  Mml-Mir-147  Mmr-Mir-147  Mmu-Mir-147  Neu-Mir-147  Oan-Mir-147  Ocu-Mir-147  Pab-Mir-147  Pbv-Mir-147-v2  Pma-Mir-147  Rno-Mir-147-v2  Sha-Mir-147  Spt-Mir-147  Tgu-Mir-147  Tni-Mir-147 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 GL343506.1: 18029-18086 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-147-v2)		 Mir-147-v1 GL343506.1: 18028-18087 [-] UCSC Ensembl
Mir-147-v2 GL343506.1: 18029-18086 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCCUCUUCACGUGACACUCUAUGAAUCUAGUGGAAUCACUUCCGCACAAACUAGAUGAAUGAAACCAGUGUGCGGAAAUGCUUCUGCUACAUUUUUAGGGUCUCCCUCCAGCUUUUUG
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Structure
        10          20        30        40        50        
GCCUCUUCACGUGACAC--|   U    C   UG   U  C         AACUAGAUG 
                   UCUA GAAU UAG  GAA CA UUCCGCACA         A
                   GGAU UUUA AUC  CUU GU AAGGCGUGU         A
GUUUUUCGACCUCCCUCUG^   U    C   GU   C  A         GACCAAAGU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sk Ta Ta To Wh
Star sequence

Aca-Mir-147-v2_5p*
mirBase accessionNone
Sequence 
0- UGGAAUCACUUCCGCACAAACU -22
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Mature sequence

Aca-Mir-147-v2_3p
mirBase accessionMIMAT0021779
Sequence 
36- AGUGUGCGGAAAUGCUUCUGCU -58
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